RNA id: TU161510



Basic Information


Item Value
RNA id TU161510
length 294
RNA type TUCP
GC content 0.59
exon number 1
gene id G109287
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 882459 ~ 882752 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gggcggaggtcgatgatcgactttgtggttgtatcatctgatctccggccgcatgtcttggacactcgggtgaagagaggggcggagctgtcaactgatcaccacctggtggtgagttggatccgttggcgcgggaggaggccagacagacttggcaggcccaaacgtaccgtgagggtctgttgggaacgtttggcagagacccctgtcagggagatcttcaactcccgcctccggcagaactttgaccggatcccgagggaggctggagacattgagtccgagtggactatg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU161506 lncRNA downstream 71851 810033 ~ 810608 (-) True G109283
TU161499 lncRNA downstream 222107 659968 ~ 660352 (-) True G109276
TU161496 lncRNA downstream 274028 608080 ~ 608431 (-) True G109273
TU161495 lncRNA downstream 296956 584657 ~ 585503 (-) False LOC122360679
XR_006252827.1 lncRNA downstream 296981 582333 ~ 585478 (-) True LOC122360679
TU161515 lncRNA upstream 82986 965738 ~ 966074 (-) True G109292
TU161533 lncRNA upstream 230991 1113743 ~ 1121705 (-) True G109308
TU161535 lncRNA upstream 230991 1113743 ~ 1195829 (-) False G109308
TU161543 lncRNA upstream 398118 1280870 ~ 1281255 (-) True G109316
TU161547 lncRNA upstream 442868 1325620 ~ 1325934 (-) True G109320
XM_043261994.1 mRNA upstream 399559 1282311 ~ 1292313 (-) True LOC122361052
XM_043260038.1 mRNA upstream 613834 1496586 ~ 1510434 (-) True LOC122359849
XM_043260039.1 mRNA upstream 613834 1496586 ~ 1509311 (-) False LOC122359849
XM_043260624.1 mRNA upstream 662535 1545287 ~ 1549931 (-) False pmvk
XM_043260625.1 mRNA upstream 662535 1545287 ~ 1549823 (-) True pmvk
TU161498 other downstream 249562 632465 ~ 632897 (-) True G109275
XR_006252910.1 other downstream 587474 294867 ~ 294985 (-) True LOC122361256
XR_006252883.1 other downstream 603985 278356 ~ 278474 (-) True LOC122361163
XR_006252872.1 other downstream 604380 277961 ~ 278079 (-) True LOC122361151
XR_006252913.1 other downstream 606354 275987 ~ 276105 (-) True LOC122361280
TU161934 other upstream 2245309 3128061 ~ 3129979 (-) True G109600
TU162095 other upstream 3212005 4094757 ~ 4095504 (-) True G109724
XR_006252797.1 other upstream 4349459 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other upstream 4352894 5235646 ~ 5245460 (-) False vegfaa
XR_006252935.1 other upstream 4476758 5359510 ~ 5359679 (-) True LOC122361376

Expression Profile