RNA id: TU162095



Basic Information


Item Value
RNA id TU162095
length 748
RNA type TUCP
GC content 0.45
exon number 1
gene id G109724
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 4094757 ~ 4095504 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCAAGTGTTGCCTTCCAACCACCTGCTACCACCTCACAACAGCCAAGCACCTATGAAAACGAGTATGTTCATAACTCATGCGAAGCTGGATTTGAGAATAACAATTCAACACCCTTGCAACGTTTTAGGCAAAATAGCAATGGTTATCCGACTCCTCAGCCCTACCCTATTTCCCCAAATTCAAACAACTGCAGCTCAAACATGAATGACTTTGTAAGATTTCTTGCTCGTCGTGAGCTAGTGGCAACAGGTTTACTGCAGTTTAATGACAAACCTCAGAATTACAGAGCCTGGAAACGTTCTTTTCAGTCTGCAACTGCTGATTTAAACCTGACTTCTAGTGAAGAGATGGATCTCCTTCTAAAGTGGCTTGGCAAGGAGTCTGCAGAGCATGTTGAGCAGATAAGGGCAATACACATCAACCATCCACAAGCAGGACTGGCTATGGCATGGGACAGACTGGATCAAGCGTATGGCTCTACGGAAGTAATAGAAGATGCCCTATTCAAACGTATTGATGCCTTTCCTAAAATAACCAACAGAGATTATTCTAAACTGACAAAATTGAGTGATCTGTTAATGGAGCTTCAGTCAGCTAAGGCAGAAGGAGACTTGCCAGGTCTTGCTTTCTTAGACACTGCAAGAGGTGTCAATCCGATAGTACAGAAGCTACCGTTTCGTTTGCAAGAGAGATGGGCATCAGTCGGCGCAGCCTACAAGCGTCAAAATCGTGTTCCTTATCCCCCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU162087 lncRNA downstream 153118 3940957 ~ 3941639 (-) True G109716
TU162009 lncRNA downstream 202934 3891138 ~ 3891823 (-) True G109650
TU161994 lncRNA downstream 377674 3709267 ~ 3717083 (-) True G109638
TU161958 lncRNA downstream 465340 3628808 ~ 3629417 (-) True G109615
TU161957 lncRNA downstream 469745 3624642 ~ 3625012 (-) True G109614
TU162114 lncRNA upstream 58213 4153717 ~ 4155712 (-) True G109729
XR_006252809.1 lncRNA upstream 84903 4180407 ~ 4181293 (-) True LOC122360497
TU162129 lncRNA upstream 291897 4387401 ~ 4387701 (-) True G109743
TU162148 lncRNA upstream 717815 4813319 ~ 4814496 (-) True G109760
TU162253 lncRNA upstream 723303 4818807 ~ 4819736 (-) True G109819
XM_043260701.1 mRNA downstream 351145 3729142 ~ 3743612 (-) False csf3r
XM_043260703.1 mRNA downstream 351145 3729142 ~ 3743612 (-) False csf3r
XM_043260702.1 mRNA downstream 351145 3729142 ~ 3743612 (-) False csf3r
XM_043260700.1 mRNA downstream 351145 3729142 ~ 3743612 (-) True csf3r
XM_043261376.1 mRNA downstream 395687 3684118 ~ 3699070 (-) False hace1
XM_043260881.1 mRNA upstream 63983 4159487 ~ 4160521 (-) True LOC122360352
XM_043260882.1 mRNA upstream 108177 4203681 ~ 4243342 (-) True LOC122360353
XM_043261771.1 mRNA upstream 416470 4511974 ~ 4614017 (-) True LOC122360932
XM_043261763.1 mRNA upstream 700306 4795810 ~ 4799825 (-) True LOC122360926
XM_043261296.1 mRNA upstream 793979 4889483 ~ 4894107 (-) False smpdl3b
TU161934 other downstream 964778 3128061 ~ 3129979 (-) True G109600
TU161510 other downstream 3212005 882459 ~ 882752 (-) True G109287
TU161498 other downstream 3461860 632465 ~ 632897 (-) True G109275
XR_006252910.1 other downstream 3799772 294867 ~ 294985 (-) True LOC122361256
XR_006252883.1 other downstream 3816283 278356 ~ 278474 (-) True LOC122361163
XR_006252797.1 other upstream 1136707 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other upstream 1140142 5235646 ~ 5245460 (-) False vegfaa
XR_006252935.1 other upstream 1264006 5359510 ~ 5359679 (-) True LOC122361376
TU162692 other upstream 1721560 5817064 ~ 5818362 (-) False ndufa3
TU162864 other upstream 1848717 5944221 ~ 5948789 (-) False LOC122359839

Expression Profile