Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162464 |
| length | 1155 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G109944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056714.1 |
| NCBI id | CM032083.1 |
| chromosome length | 28146790 |
| location | 5435832 ~ 5437067 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | description |
|---|---|
| ko04330 | Notch signaling pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162484 | lncRNA | downstream | 38315 | 5397297 ~ 5397517 (-) | True | G109956 |
| TU162481 | lncRNA | downstream | 39478 | 5396130 ~ 5396354 (-) | True | G109953 |
| TU162462 | lncRNA | downstream | 88273 | 5346405 ~ 5347559 (-) | True | G109942 |
| TU162416 | lncRNA | downstream | 114536 | 5247238 ~ 5321296 (-) | True | G109914 |
| XR_006252732.1 | lncRNA | downstream | 228413 | 5198791 ~ 5207419 (-) | True | LOC122359853 |
| TU162539 | lncRNA | upstream | 138573 | 5575640 ~ 5581732 (-) | True | LOC122360242 |
| XR_006252793.1 | lncRNA | upstream | 139921 | 5576988 ~ 5578651 (-) | False | LOC122360242 |
| TU162540 | lncRNA | upstream | 141852 | 5578919 ~ 5581732 (-) | False | LOC122360242 |
| TU162541 | lncRNA | upstream | 141852 | 5578919 ~ 5581732 (-) | False | LOC122360242 |
| TU162673 | lncRNA | upstream | 337780 | 5774847 ~ 5777041 (-) | True | G110090 |
| XM_043261998.1 | mRNA | downstream | 15192 | 5418473 ~ 5420640 (-) | True | tpbgb |
| XM_043260026.1 | mRNA | downstream | 55870 | 5367332 ~ 5379962 (-) | True | rpa2 |
| XM_043261275.1 | mRNA | downstream | 75414 | 5355987 ~ 5360418 (-) | True | ppp1r8b |
| XM_043260761.1 | mRNA | downstream | 190371 | 5235903 ~ 5245461 (-) | False | vegfaa |
| XM_043260760.1 | mRNA | downstream | 190398 | 5232211 ~ 5245434 (-) | False | vegfaa |
| XM_043260677.1 | mRNA | upstream | 71550 | 5508617 ~ 5559896 (-) | True | bckdhb |
| XM_043260675.1 | mRNA | upstream | 123414 | 5560481 ~ 5570782 (-) | False | ttk |
| XM_043260674.1 | mRNA | upstream | 123414 | 5560481 ~ 5570782 (-) | True | ttk |
| XM_043260679.1 | mRNA | upstream | 134434 | 5571501 ~ 5573800 (-) | True | dctn3 |
| XM_043260424.1 | mRNA | upstream | 345600 | 5782667 ~ 5790534 (-) | False | si:dkey-283b15.2 |
| XR_006252935.1 | other | downstream | 76153 | 5359510 ~ 5359679 (-) | True | LOC122361376 |
| XR_006252797.1 | other | downstream | 190371 | 5232211 ~ 5245461 (-) | True | vegfaa |
| XR_006252796.1 | other | downstream | 190372 | 5235646 ~ 5245460 (-) | False | vegfaa |
| TU162095 | other | downstream | 1340328 | 4094757 ~ 4095504 (-) | True | G109724 |
| TU161934 | other | downstream | 2305853 | 3128061 ~ 3129979 (-) | True | G109600 |
| TU162692 | other | upstream | 379997 | 5817064 ~ 5818362 (-) | False | ndufa3 |
| TU162864 | other | upstream | 507154 | 5944221 ~ 5948789 (-) | False | LOC122359839 |
| TU162885 | other | upstream | 592141 | 6029208 ~ 6034777 (-) | True | G110208 |
| TU162893 | other | upstream | 659608 | 6096675 ~ 6099927 (-) | True | G110215 |
| TU163014 | other | upstream | 1644895 | 7081962 ~ 7083524 (-) | True | G110303 |
