RNA id: TU162695


Basic Information

Item Value
RNA id TU162695
length 331
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G110106
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5852432 ~ 5852762 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgttatctgacaaaagtaataataaataaaattctataaatgttaaccaatgaaagtcagacattgtttttcaaccatgcttcaacagaattattaaaaaaaaataaactcatgaaacagacctggacaaaaatgatggtacccctaacttaatattttgttgcgcaaccttttgaggcaatcactgcaatcaaacgcttcctgtaactgtcaatgagacttctgcacctctcagcaggtattttggcccactcctcatgagcaaactgctccagttgtgtccggtttgaagggtgccttttccagactgcatgtttcagctccttccaaa

Function

GO: NA

KEGG:

id description
ko04740 Olfactory transduction

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU162691 lncRNA downstream 35559 5815560 ~ 5816873 (-) True G110102
TU162688 lncRNA downstream 38748 5809971 ~ 5813684 (-) True G110100
TU162689 lncRNA downstream 39911 5809971 ~ 5812521 (-) False G110100
TU162678 lncRNA downstream 44083 5778754 ~ 5808349 (-) False G110093
TU162868 lncRNA upstream 49815 5902577 ~ 6184069 (-) False LOC122359839
TU162879 lncRNA upstream 144859 5997621 ~ 5999361 (-) True G110206
TU162905 lncRNA upstream 266023 6118785 ~ 6119767 (-) True G110221
TU162910 lncRNA upstream 284345 6137107 ~ 6207805 (-) True G110224
TU162914 lncRNA upstream 286632 6139394 ~ 6208668 (-) True G110227
XM_043260635.1 mRNA downstream 2218 5834157 ~ 5850214 (-) False arnt
XM_043260632.1 mRNA downstream 2218 5834157 ~ 5850214 (-) False arnt
XM_043260634.1 mRNA downstream 2218 5834157 ~ 5850214 (-) False arnt
XM_043260631.1 mRNA downstream 2218 5834157 ~ 5850214 (-) True arnt
XM_043261179.1 mRNA downstream 29582 5820991 ~ 5822850 (-) True mrpl51
XM_043261014.1 mRNA upstream 714 5853476 ~ 5873058 (-) True cers2b
XM_043261140.1 mRNA upstream 24286 5877048 ~ 5900217 (-) False celf3b
XM_043261139.1 mRNA upstream 24287 5877049 ~ 5900216 (-) True celf3b
XM_043261141.1 mRNA upstream 24287 5877049 ~ 5900213 (-) False celf3b
XM_043261145.1 mRNA upstream 24287 5877049 ~ 5900210 (-) False celf3b
TU162692 other downstream 34070 5817064 ~ 5818362 (-) False ndufa3
XR_006252935.1 other downstream 492753 5359510 ~ 5359679 (-) True LOC122361376
XR_006252797.1 other downstream 606971 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other downstream 606972 5235646 ~ 5245460 (-) False vegfaa
TU162095 other downstream 1756928 4094757 ~ 4095504 (-) True G109724
TU162864 other upstream 91459 5944221 ~ 5948789 (-) False LOC122359839
TU162885 other upstream 176446 6029208 ~ 6034777 (-) True G110208
TU162893 other upstream 243913 6096675 ~ 6099927 (-) True G110215
TU163014 other upstream 1229200 7081962 ~ 7083524 (-) True G110303
TU163032 other upstream 1342728 7195490 ~ 7201381 (-) True LOC122360222

Expression Profile