RNA id: TU162864


Basic Information

Item Value
RNA id TU162864
length 499
RNA type TUCP
GC content 0.59
exon number 3
gene id LOC122359839
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5902577 ~ 6184133 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTCCGCGGATCtggtgtttgtttctgtttctctcacgAGCCTGACGCAGAAGAACGCACCGCGAGCGGAGGATGACGCGCGCGTCTCTGAGCAGATTGTGTGCGTTTTGGTGTTGTGCGTCTGCCGTCCTGTCCCTAACAACAGCTGAGGAAGCAGAGAAGCCGGCGGCCGGACGCAAGTCTCGTCAGACAGAAGAGGAGCCTCCTGAAGGAGTTTGGGGTCCATGGAGCGAGTGGGTGGAGTGTTCTCAGAGCTGCGGAGTGGGCGTGTCTGAGAGGCGGAGACATTGTATGCCGCCTCCCCAAACTCCGCCCTTCACGTGGAACCGACCGGTTTACCTTCCACCGGGTGTCCCGAACAACACCCCCGTGATCTCTGCGGTCAGACCGTACTACAACTCCTTGTATCCCGTCAACGAACCCCCTCCTTACGGAGCAGAAGGCGCAGAGAGGCCTCCTTATTTTTCCCCGCCTCTCCCAGCCAATCCCAATCCTGGAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU162695 lncRNA downstream 91459 5852432 ~ 5852762 (-) True G110106
TU162691 lncRNA downstream 127348 5815560 ~ 5816873 (-) True G110102
TU162688 lncRNA downstream 130537 5809971 ~ 5813684 (-) True G110100
TU162689 lncRNA downstream 131700 5809971 ~ 5812521 (-) False G110100
TU162682 lncRNA downstream 159992 5783296 ~ 5784229 (-) False si:dkey-283b15.2
TU162879 lncRNA upstream 48832 5997621 ~ 5999361 (-) True G110206
TU162905 lncRNA upstream 169996 6118785 ~ 6119767 (-) True G110221
TU162910 lncRNA upstream 188318 6137107 ~ 6207805 (-) True G110224
TU162914 lncRNA upstream 190605 6139394 ~ 6208668 (-) True G110227
TU162897 lncRNA upstream 191750 6140539 ~ 6141321 (-) True G110216
XM_043261140.1 mRNA downstream 44004 5877048 ~ 5900217 (-) False celf3b
XM_043261139.1 mRNA downstream 44005 5877049 ~ 5900216 (-) True celf3b
XM_043261141.1 mRNA downstream 44008 5877049 ~ 5900213 (-) False celf3b
XM_043261145.1 mRNA downstream 44011 5877049 ~ 5900210 (-) False celf3b
XM_043261144.1 mRNA downstream 44011 5877049 ~ 5900210 (-) False celf3b
XM_043260033.1 mRNA upstream 300130 6248919 ~ 6261997 (-) True tars2
XM_043260029.1 mRNA upstream 314715 6263504 ~ 6279577 (-) False rprd2b
XM_043260028.1 mRNA upstream 314715 6263504 ~ 6279575 (-) True rprd2b
XM_043260027.1 mRNA upstream 330920 6279709 ~ 6339496 (-) True LOC122359836
XM_043260113.1 mRNA upstream 613061 6561850 ~ 6566189 (-) False irx1a
TU162692 other downstream 125859 5817064 ~ 5818362 (-) False ndufa3
XR_006252935.1 other downstream 584542 5359510 ~ 5359679 (-) True LOC122361376
XR_006252797.1 other downstream 698760 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other downstream 698761 5235646 ~ 5245460 (-) False vegfaa
TU162095 other downstream 1848717 4094757 ~ 4095504 (-) True G109724
TU162885 other upstream 80419 6029208 ~ 6034777 (-) True G110208
TU162893 other upstream 147886 6096675 ~ 6099927 (-) True G110215
TU163014 other upstream 1133173 7081962 ~ 7083524 (-) True G110303
TU163032 other upstream 1246701 7195490 ~ 7201381 (-) True LOC122360222
TU163145 other upstream 1661840 7610629 ~ 7618585 (-) False cdkal1

Expression Profile