RNA id: TU163295



Basic Information


Item Value
RNA id TU163295
length 401
lncRNA type sense_over
GC content 0.29
exon number 1
gene id mkxb
representative False

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8082900 ~ 8092455 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAATGACATAGTGAAGAAAGTTTGATGTGTGGAAGATCACTACAACTAAACACAGAAGCACAAAAATATGATCTTATTCCGATTTAGACtctgaaatacaatttttgtcagtagctaaaatgtaatatattcatatatatattcaattttcCTAAgttatgttaattttatttttaatcgaCACAGGATTGTTGTCATCCTATGGCAATGGCATATACATGTGGGTTCTTGTGTTTAAGTATTGCATATAGAGgaagtttctttttctttcttttttatattcttttttttttttttgaatttttttaacaaaccttTGGTTTGTTATTGGATGGCTTTTAAGTTCATTTGGGCCATTGCCTGTGAAGATAATCATGCAAAATTCAGTCAAATGAGAgcta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252839.1 lncRNA downstream 90033 7988950 ~ 7992867 (-) True LOC122360778
XR_006252846.1 lncRNA downstream 122525 7958881 ~ 7960375 (-) True LOC122360975
TU163265 lncRNA downstream 122862 7959291 ~ 7960038 (-) False LOC122360975
TU163199 lncRNA downstream 178307 7849679 ~ 7904593 (-) True G110449
TU163204 lncRNA downstream 181892 7883932 ~ 7901008 (-) True G110452
TU163299 lncRNA upstream 69 8083369 ~ 8083825 (-) False mkxb
TU163329 lncRNA upstream 151608 8234908 ~ 8235793 (-) True G110546
TU163331 lncRNA upstream 154458 8237758 ~ 8239176 (-) True G110548
TU163610 lncRNA upstream 464482 8547782 ~ 8551552 (-) True G110753
TU163615 lncRNA upstream 464482 8547782 ~ 8551552 (-) False G110753
XM_043260585.1 mRNA downstream 8596 8067575 ~ 8074304 (-) True LOC122360189
XM_043260586.1 mRNA downstream 10020 8069000 ~ 8072880 (-) False LOC122360189
XM_043260655.1 mRNA downstream 29715 8005718 ~ 8053185 (-) False mib1
XM_043260652.1 mRNA downstream 29715 8005718 ~ 8053185 (-) False mib1
XM_043260656.1 mRNA downstream 29715 8005718 ~ 8053185 (-) False mib1
XM_043260404.1 mRNA upstream 21926 8105226 ~ 8143954 (-) True mpp7b
XM_043260193.1 mRNA upstream 111801 8195101 ~ 8200339 (-) True adipoqb
XM_043261660.1 mRNA upstream 156031 8239331 ~ 8256537 (-) True LOC122360799
XM_043261753.1 mRNA upstream 212726 8296026 ~ 8298481 (-) True LOC122360914
XM_043261729.1 mRNA upstream 258300 8341600 ~ 8363640 (-) True LOC122360896
TU163187 other downstream 252183 7828820 ~ 7830717 (-) False LOC122360680
TU163145 other downstream 464315 7610629 ~ 7618585 (-) False cdkal1
TU163147 other downstream 464315 7610834 ~ 7618585 (-) False cdkal1
TU163032 other downstream 881519 7195490 ~ 7201381 (-) True LOC122360222
TU163014 other downstream 999376 7081962 ~ 7083524 (-) True G110303
TU163302 other upstream 7351 8090651 ~ 8092353 (-) False mkxb
TU163327 other upstream 132729 8216029 ~ 8216595 (-) True G110544
TU163340 other upstream 215489 8298789 ~ 8302245 (-) True G110554
TU163343 other upstream 228965 8312265 ~ 8316685 (-) True G110556
TU163623 other upstream 550050 8633350 ~ 8636222 (-) True wu:fj39g12

Expression Profile