RNA id: TU163327



Basic Information


Item Value
RNA id TU163327
length 513
RNA type TUCP
GC content 0.62
exon number 3
gene id G110544
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8216029 ~ 8216595 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tgttcgagaggaggggcgggtattgttcaggtctggcggcgtgtgacgaggcacacctgaagtgagttagcctcgttaccgtcgccgttaaataccgaacgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcgcgatggacctcaccccgccgtccgagaacacacagctcatcccactctgccgccggagcaaagaaacgacggagacgccgcggaagaagccgccgcccctcgcgccccgggccagaaaaaggggagcgcgtgcgaccgccggactccgccccttacctggacccttccccccctggaacacggcctaaacctgcacgttacccggagcacgacgaggacaccagatcccccttttatttggacactttcccccttggacactttattttgttaataaaaagcctctccgaggcctgacgccacgcccactgtgtctgtcgttggctcctcccgtcaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163299 lncRNA downstream 132204 8083369 ~ 8083825 (-) False mkxb
TU163295 lncRNA downstream 132729 8082900 ~ 8083300 (-) False mkxb
XR_006252839.1 lncRNA downstream 223162 7988950 ~ 7992867 (-) True LOC122360778
XR_006252846.1 lncRNA downstream 255654 7958881 ~ 7960375 (-) True LOC122360975
TU163329 lncRNA upstream 18313 8234908 ~ 8235793 (-) True G110546
TU163331 lncRNA upstream 21163 8237758 ~ 8239176 (-) True G110548
TU163610 lncRNA upstream 331187 8547782 ~ 8551552 (-) True G110753
TU163615 lncRNA upstream 331187 8547782 ~ 8551552 (-) False G110753
TU163638 lncRNA upstream 373303 8589898 ~ 8590634 (-) True G110773
XM_043260193.1 mRNA downstream 15690 8195101 ~ 8200339 (-) True adipoqb
XM_043260404.1 mRNA downstream 72075 8105226 ~ 8143954 (-) True mpp7b
XM_043260483.1 mRNA downstream 123574 8082906 ~ 8092455 (-) False mkxb
XM_043260482.1 mRNA downstream 123574 8082906 ~ 8092455 (-) True mkxb
XM_043260585.1 mRNA downstream 141725 8067575 ~ 8074304 (-) True LOC122360189
XM_043261660.1 mRNA upstream 22736 8239331 ~ 8256537 (-) True LOC122360799
XM_043261753.1 mRNA upstream 79431 8296026 ~ 8298481 (-) True LOC122360914
XM_043261729.1 mRNA upstream 125005 8341600 ~ 8363640 (-) True LOC122360896
XM_043261737.1 mRNA upstream 218051 8434646 ~ 8451791 (-) False pals2a
XM_043261735.1 mRNA upstream 218051 8434646 ~ 8451791 (-) True pals2a
TU163302 other downstream 123676 8090651 ~ 8092353 (-) False mkxb
TU163187 other downstream 385312 7828820 ~ 7830717 (-) False LOC122360680
TU163145 other downstream 597444 7610629 ~ 7618585 (-) False cdkal1
TU163147 other downstream 597444 7610834 ~ 7618585 (-) False cdkal1
TU163032 other downstream 1014648 7195490 ~ 7201381 (-) True LOC122360222
TU163340 other upstream 82194 8298789 ~ 8302245 (-) True G110554
TU163343 other upstream 95670 8312265 ~ 8316685 (-) True G110556
TU163623 other upstream 416755 8633350 ~ 8636222 (-) True wu:fj39g12
XR_006252934.1 other upstream 430819 8647414 ~ 8647555 (-) True LOC122361375
TU163829 other upstream 929335 9145930 ~ 9152183 (-) True G110911

Expression Profile