RNA id: TU163615



Basic Information


Item Value
RNA id TU163615
length 1239
lncRNA type inter_gene
GC content 0.39
exon number 5
gene id G110753
representative False

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8547782 ~ 8551552 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cggcatttaaatattttattgggggcattacattttttatggcCTTTTCTTAAAATCTGCGATCTGCATTGACTGAATTAGTTCTGTACTTAACTGTGATTCATTTAAACTACAgagttaaatgaaaaataagttactttttctgcatgcatttgctttttttggtaAACGGTGACGgtcatacagtacattttttcccccttttaaaAATTGTCTTTATATATTGCAGAAACACGTTgcaaagaaaaatgataaatatggcacaaaacacaaaatgctgAGAGCTTGTTTTGCGcaaacctgtaaaaaaaaaaaatgaaaaattcaagGTTCATTTAAGGTCTGTGCACCTTTCCTCTGATGTTGGAGTTCTAATTCAAGTTAAGTGATCTGAGTTAATTCTGAAACTACTGGAAACCATGTGCATACGCACATGTACAGTtgtcaacaaaacatttcatcataAGGTTTGCTTTTTCCACCTGATGTGGTTAAGTCATAGTCATTTTGCTACTTCAGGTACATGTAGGGTGTTGACTTTCACAGTAAAGaggattcaaaaacaaaacgctaatattttttgaacagtataaaatTGGATTAACTCAATTTTTGGATTATCCTCCAATCTTTATTTGCATCACAATATTGAATACAAAAAGACAGATGTTTAGTTCTTGTATCCTCTGCTGGCTCTGCGACCACGGGCACGCTCGAACTTCCTGCCTTTGGAGCGCACATAGGTGCAGAAAGAGCCAGCTGGTCAAAGGTCATGATCTGTCCACCAGCCTTCAAGATCCTGCTACGAGCACGGTCGGTCAACTTGAGGGCACACCCTTCAATTTAGGGATCTTCAGAAGCCTTACATCATCAGTAATAGTTCCCACAACAACAGCAGTCAGGTTTTCACGGCCTGGAAGCTTCATCTTACGGATCTAGaagcaGTCGGGACAAGGCCAGAGGGGGTCGGTTGGTCTTGCTCATGAAGAGTCTCCTCAGAATGACCTTGTTGAAGGGAGCATCAGAACGGCGAGACAGGAATCTGTACAACTACTTGACCAAGAGCCGCAGGTAAATATCCTGACTTTTAGGCTCCTTCCTGTGAACCTTACGGTCCTTGTTGTGTCTGATGTCAACTCCCTTTTGGATCAAACAAAATCaattacacacaaataaaaatatataaaaataaaaaaacgtggAGCAGCGTCAGATTTATCATGTTCAGTGGACTACACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163331 lncRNA downstream 308606 8237758 ~ 8239176 (-) True G110548
TU163329 lncRNA downstream 311989 8234908 ~ 8235793 (-) True G110546
TU163299 lncRNA downstream 463957 8083369 ~ 8083825 (-) False mkxb
TU163295 lncRNA downstream 464482 8082900 ~ 8083300 (-) False mkxb
XR_006252839.1 lncRNA downstream 554915 7988950 ~ 7992867 (-) True LOC122360778
TU163638 lncRNA upstream 38346 8589898 ~ 8590634 (-) True G110773
TU163682 lncRNA upstream 293973 8845525 ~ 8845993 (-) True G110807
TU163727 lncRNA upstream 449235 9000787 ~ 9001428 (-) True G110836
TU163733 lncRNA upstream 452986 9004538 ~ 9005206 (-) True G110842
TU163741 lncRNA upstream 455745 9007297 ~ 9007532 (-) True G110849
XM_043261734.1 mRNA downstream 3505 8540602 ~ 8544277 (-) False LOC122360899
XM_043261733.1 mRNA downstream 3505 8540602 ~ 8544277 (-) True LOC122360899
XM_043261748.1 mRNA downstream 71934 8474098 ~ 8475848 (-) True uts2r3
XM_043261756.1 mRNA downstream 81688 8454966 ~ 8466094 (-) True LOC122360918
XM_043261754.1 mRNA downstream 94562 8452823 ~ 8453220 (-) True LOC122360915
XM_043261728.1 mRNA upstream 6784 8558336 ~ 8571473 (-) True plekhg6
XM_043261747.1 mRNA upstream 22475 8574027 ~ 8580269 (-) True tnfrsf1a
XM_043261750.1 mRNA upstream 40683 8592235 ~ 8600129 (-) True si:dkey-260g12.1
XM_043261731.1 mRNA upstream 49156 8600708 ~ 8617241 (-) True iffo1b
XM_043261732.1 mRNA upstream 49156 8600708 ~ 8617240 (-) False iffo1b
TU163343 other downstream 231097 8312265 ~ 8316685 (-) True G110556
TU163340 other downstream 245537 8298789 ~ 8302245 (-) True G110554
TU163327 other downstream 331187 8216029 ~ 8216595 (-) True G110544
TU163302 other downstream 455429 8090651 ~ 8092353 (-) False mkxb
TU163187 other downstream 717065 7828820 ~ 7830717 (-) False LOC122360680
TU163623 other upstream 81798 8633350 ~ 8636222 (-) True wu:fj39g12
XR_006252934.1 other upstream 95862 8647414 ~ 8647555 (-) True LOC122361375
TU163829 other upstream 594378 9145930 ~ 9152183 (-) True G110911
TU163906 other upstream 719419 9270971 ~ 9272605 (-) True G110974
TU164366 other upstream 2195241 10746793 ~ 10748300 (-) False LOC122361037

Expression Profile