RNA id: TU164072


Basic Information

Item Value
RNA id TU164072
length 273
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G111097
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9875392 ~ 9875664 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCACAGTTTATTAACTCTCCAGTCCTCAATAATCatcacttgtttttttctgatggTTACTAAGGATAGTTATTATTAGTCATACTGAGGACGATAGGGAACCACTAATGGGATagttcattgtaaaaaaaaattataaaaaagcataaaaagtatattttttataaatcaatacttttttcactacaaaaaaataacatgaccTGAAGATGGTTAAATGATAcagaatgtacatttttgggtgaactatgcctccAAGTATTACATTTTGG

Function

GO:

id name namespace
GO:0035379 carbon dioxide transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164002 lncRNA downstream 120412 9754315 ~ 9754980 (-) True G111048
TU163998 lncRNA downstream 198887 9674864 ~ 9676505 (-) True G111045
TU163971 lncRNA downstream 251273 9623700 ~ 9624119 (-) True G111025
TU163969 lncRNA downstream 254939 9620119 ~ 9620453 (-) True G111024
TU163966 lncRNA downstream 268319 9599932 ~ 9607073 (-) True G111021
TU164073 lncRNA upstream 3971 9879635 ~ 9888229 (-) False gask1a
TU164074 lncRNA upstream 13407 9889071 ~ 9902981 (-) False gask1a
TU164327 lncRNA upstream 854504 10730168 ~ 10730415 (-) True G111298
TU164374 lncRNA upstream 915900 10791564 ~ 10793616 (-) True G111329
XR_006252847.1 lncRNA upstream 1048451 10924115 ~ 10924764 (-) True LOC122361039
XM_043261431.1 mRNA downstream 16761 9818586 ~ 9858631 (-) False snrka
XM_043261430.1 mRNA downstream 17368 9818586 ~ 9858024 (-) True snrka
XM_043261435.1 mRNA downstream 88300 9778317 ~ 9787092 (-) True abhd5a
XM_043261852.1 mRNA downstream 160741 9705840 ~ 9714651 (-) True tcaim
XM_043261087.1 mRNA downstream 173125 9678223 ~ 9702267 (-) True trim71
XM_043261423.1 mRNA upstream 1547 9877211 ~ 9902814 (-) True gask1a
XM_043261427.1 mRNA upstream 28809 9904473 ~ 9914342 (-) True entpd3
XM_043260001.1 mRNA upstream 53672 9929336 ~ 9945606 (-) True ddc
XM_043260661.1 mRNA upstream 71687 9947351 ~ 10010750 (-) False grb10b
XM_043260658.1 mRNA upstream 71687 9947351 ~ 10010750 (-) False grb10b
TU163906 other downstream 602787 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 723209 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 1227837 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 1239170 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 1558707 8312265 ~ 8316685 (-) True G110556
TU164366 other upstream 871129 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 986287 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 986287 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 1395000 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 1535014 11410678 ~ 11411777 (-) True G111490

Expression Profile