RNA id: TU164074


Basic Information

Item Value
RNA id TU164074
length 518
lncRNA type sense_over
GC content 0.46
exon number 2
gene id gask1a
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9877211 ~ 9902981 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCAAGTCCACCATCCTCCTGCAACGTGTTGCTGGAGATCAGAGCTTTGTTCCGAGACTTTGGAAACTTTGCAATGGGAATTCAAAAATAAACCCAGGGAAAGTCACTAAACAATGTGACTTTGGATGCGTATCATGCATACACCGGTCCTTTTCAAATGAGAGCAAATTGCAAGAAGGTTTACTTGCAGGAATAACGCCGTGTTTGCATGGATGAGGAGCGCAGGAATGAAGATGATGTGGCGCTGATGCTGTGAGTGAACAGCCGAAACACATTAGACTTCTAGTGGTGGTGTTTATAATGGCTTTGAGAGTGTGGTTGAAGTTCAGACTAAAATGTCGGTTTGTGGTGATCTTCCTGTTTCTCTTCAGTCTGTTGGTGGTAATGATATACACCCTTCCTCCCTTCCCAACTGAGCCGAGCAGGCTGAACGTTAGGGGCCCCCGCAATAACAAACCCAGCAGGCTGGTCGAGAAGTTGTCTCTGAGACACTATATTCCAACATCTTTATATGAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164073 lncRNA downstream 842 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 13407 9875392 ~ 9875664 (-) True G111097
TU164002 lncRNA downstream 134091 9754315 ~ 9754980 (-) True G111048
TU163998 lncRNA downstream 212566 9674864 ~ 9676505 (-) True G111045
TU163971 lncRNA downstream 264952 9623700 ~ 9624119 (-) True G111025
TU164327 lncRNA upstream 827187 10730168 ~ 10730415 (-) True G111298
TU164374 lncRNA upstream 888583 10791564 ~ 10793616 (-) True G111329
XR_006252847.1 lncRNA upstream 1021134 10924115 ~ 10924764 (-) True LOC122361039
TU164468 lncRNA upstream 1256858 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 1322205 11225186 ~ 11225409 (-) True G111420
XM_043261431.1 mRNA downstream 30440 9818586 ~ 9858631 (-) False snrka
XM_043261430.1 mRNA downstream 31047 9818586 ~ 9858024 (-) True snrka
XM_043261435.1 mRNA downstream 101979 9778317 ~ 9787092 (-) True abhd5a
XM_043261852.1 mRNA downstream 174420 9705840 ~ 9714651 (-) True tcaim
XM_043261087.1 mRNA downstream 186804 9678223 ~ 9702267 (-) True trim71
XM_043261427.1 mRNA upstream 1492 9904473 ~ 9914342 (-) True entpd3
XM_043260001.1 mRNA upstream 26355 9929336 ~ 9945606 (-) True ddc
XM_043260661.1 mRNA upstream 44370 9947351 ~ 10010750 (-) False grb10b
XM_043260658.1 mRNA upstream 44370 9947351 ~ 10010750 (-) False grb10b
XM_043260660.1 mRNA upstream 44370 9947351 ~ 10009178 (-) False grb10b
TU163906 other downstream 616466 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 736888 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 1241516 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 1252849 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 1572386 8312265 ~ 8316685 (-) True G110556
TU164366 other upstream 843812 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 958970 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 958970 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 1367683 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 1507697 11410678 ~ 11411777 (-) True G111490

Expression Profile