RNA id: TU164366



Basic Information


Item Value
RNA id TU164366
length 937
RNA type TUCP
GC content 0.43
exon number 3
gene id LOC122361037
representative False

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10745576 ~ 10764305 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCATAATGCTCATTTAATACAGCTGAGATGCAGTCTTAAAAAACATCTCACATTCCTGTCATTTTTTGCTATAAATTAAAGAGATTCTTCTTGTCGTGTGagagatttgatttatttttattattcctgGACCCTGAATATAACCTATATGCGCTATGTTAGCCATCCATCTATTCACCTTGATTCTTGGggcatattaatattgcattattgtattatatatttttttgtactgtgtttgtttgatgttGTACCACGTAACTTTACgatgcattatttatacatacatttaactgagtaaataatcttttaaaataacgtTCGTAAGTGTAGATAAATAATAACCGAAACGATGTTTGACATAAGAATTTGGTTTGTACagtatttgggttttttttttctcccttcctCTTAAATGTCAAATTGTTCTTaagctgaattaaaaataaaatagccaagCATTGAGCGCAGCAGGTTACGGCGGCAAATGGTGTAGCAGCAGGTTAAGTATGTTTGCCAGTACAGactgctgtctatggaggggaCTCTGAGATGTTCTCTTGCCCCAGCAGGGATGTGAAGGCAGAAAGCGGACGCCAGCGACACCCCTCGGGTGGCATGAGTGCCAAGGAGATGGTGATCGGCCTGGAGGGCGTCGAGTTGGGTGCAGACGGCAAGACCGTGTCATACACGCAGTTCCTGTATCCAACCAATGTCCTGGGTCGTCGAAACACCATCGACTCCACGTCGTCTTTCTCTCAGTCCCGCAATGCCAGCCACCGCAGCCTCAGTCTGGCACGTGCCAACAGTAACCAGAGCAGCCTTGATACCGGCAATGAACTGGGAGATTTCAGGGAGTACGACCCCAATCTTCTGGATGACCCGCAATGGCCATGTGGAAAGCACAAAAGAGTGCTTATCTTTCCTTCGTACATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164327 lncRNA downstream 16378 10730168 ~ 10730415 (-) True G111298
TU164074 lncRNA downstream 843812 9889071 ~ 9902981 (-) False gask1a
TU164073 lncRNA downstream 858564 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 871129 9875392 ~ 9875664 (-) True G111097
TU164002 lncRNA downstream 991813 9754315 ~ 9754980 (-) True G111048
TU164374 lncRNA upstream 43264 10791564 ~ 10793616 (-) True G111329
XR_006252847.1 lncRNA upstream 175815 10924115 ~ 10924764 (-) True LOC122361039
TU164468 lncRNA upstream 411539 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 476886 11225186 ~ 11225409 (-) True G111420
TU164503 lncRNA upstream 477482 11225782 ~ 11226073 (-) True G111421
XM_043261967.1 mRNA downstream 159075 10571751 ~ 10587718 (-) True colec10
XM_043261969.1 mRNA downstream 176996 10553160 ~ 10569797 (-) False mal2
XM_043261968.1 mRNA downstream 177001 10553160 ~ 10569792 (-) True mal2
XM_043261956.1 mRNA downstream 324514 10408015 ~ 10422279 (-) True LOC122361025
XM_043261955.1 mRNA downstream 343757 10391834 ~ 10403036 (-) True prpf3
XM_043261961.1 mRNA upstream 60037 10808337 ~ 10811017 (-) False LOC122361028
XM_043261960.1 mRNA upstream 60037 10808337 ~ 10810978 (-) True LOC122361028
XM_043261964.1 mRNA upstream 69591 10817891 ~ 10823189 (-) False LOC122361032
XM_043261963.1 mRNA upstream 69591 10817891 ~ 10820678 (-) True LOC122361032
XM_043261674.1 mRNA upstream 109220 10857520 ~ 10883424 (-) True LOC122360812
TU163906 other downstream 1474188 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 1594610 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 2099238 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 2110571 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 2430108 8312265 ~ 8316685 (-) True G110556
TU164396 other upstream 113651 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 113651 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 522364 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 662378 11410678 ~ 11411777 (-) True G111490
TU165859 other upstream 2905760 13654060 ~ 13683909 (-) True zgc:92606

Expression Profile