RNA id: TU164397



Basic Information


Item Value
RNA id TU164397
length 404
RNA type TUCP
GC content 0.54
exon number 3
gene id LOC122360812
representative False

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 10857520 ~ 10883424 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGAGGATCATAGACGTTCGCCTTCTGTGTGGTTCCTGGACACGGACTACAGACAGACTCTCACGGCTGCTTTGACAGTAGAGGAGAATGAAGGCCAAGGCCCCACCTCCACCTCAACCCCCTCAGCCTGCCCCCCGCAGGATCTTCCGTAATGCTGTTCCTGATGGAGGAGGATCTTCAGTGGGAGACAGCAAGGAAAACATGCTTCGACCCTCTGTGGACCTCCATATCAGTCTGCCTTCAGGGTATCAGACCACCGTCAATGTGGATGGCAGAAAAGCTCTGATGGATTTGTTGGTGGATCTGTGCAGTCAGTATCATCTGAATCCAACATATCATACCCTGGAGCTGCTGTCACCCGATGCTCAACCTGTCATTTTTAAGCCCAACGCCCTGCTGGGCGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164374 lncRNA downstream 68335 10791564 ~ 10793616 (-) True G111329
TU164327 lncRNA downstream 131536 10730168 ~ 10730415 (-) True G111298
TU164074 lncRNA downstream 958970 9889071 ~ 9902981 (-) False gask1a
TU164073 lncRNA downstream 973722 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 986287 9875392 ~ 9875664 (-) True G111097
XR_006252847.1 lncRNA upstream 57687 10924115 ~ 10924764 (-) True LOC122361039
TU164468 lncRNA upstream 293411 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 358758 11225186 ~ 11225409 (-) True G111420
TU164503 lncRNA upstream 359354 11225782 ~ 11226073 (-) True G111421
TU164527 lncRNA upstream 394317 11260745 ~ 11261048 (-) True G111437
XM_043261964.1 mRNA downstream 38762 10817891 ~ 10823189 (-) False LOC122361032
XM_043261963.1 mRNA downstream 41273 10817891 ~ 10820678 (-) True LOC122361032
XM_043261961.1 mRNA downstream 50934 10808337 ~ 10811017 (-) False LOC122361028
XM_043261960.1 mRNA downstream 50973 10808337 ~ 10810978 (-) True LOC122361028
XM_043261971.1 mRNA downstream 97646 10745576 ~ 10764305 (-) True LOC122361037
XM_043261367.1 mRNA upstream 466747 11333175 ~ 11386993 (-) False LOC122360600
XM_043261363.1 mRNA upstream 469538 11335966 ~ 11386993 (-) False LOC122360600
XM_043261362.1 mRNA upstream 469538 11335966 ~ 11386993 (-) False LOC122360600
XM_043261361.1 mRNA upstream 469538 11335966 ~ 11386993 (-) True LOC122360600
XM_043261369.1 mRNA upstream 469928 11336356 ~ 11386993 (-) False LOC122360600
TU164366 other downstream 113651 10746793 ~ 10748300 (-) False LOC122361037
TU163906 other downstream 1589346 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 1709768 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 2214396 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 2225729 8633350 ~ 8636222 (-) True wu:fj39g12
TU164545 other upstream 404236 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 544250 11410678 ~ 11411777 (-) True G111490
TU165859 other upstream 2787632 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 3368126 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 4042897 14909325 ~ 14913646 (-) False LOC122359907

Expression Profile