RNA id: TU164700



Basic Information


Item Value
RNA id TU164700
length 279
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G111559
representative False

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11662918 ~ 11666274 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTGAATATGCCGACCCAGTCCTTGGGATGTGGTTTAATGAACTGTGTGAGGGTGTAATGGCACTCTAATGCTGCGTGAGGAAGGTAACTTTTCCCCACGTTCTGGAAGATGACATGGGCAAAATTGGACGTTTCCATGGTGTTGCTTGCTGCTGTCCCCTCCAGGAATAAAGCCATCTGTCTATCAGCAGCTGCGTCTGTGGGAATACAGGACCTCATTTTCACGATGAAGCGTCACAGAAAAACCCAGTGCTGTTTTGACGCACTTTCCAGTCTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252859.1 lncRNA downstream 93181 11562878 ~ 11569737 (-) True LOC122361126
TU164642 lncRNA downstream 118586 11543916 ~ 11544332 (-) True G111516
TU164633 lncRNA downstream 174091 11487682 ~ 11488827 (-) True G111508
XR_006252826.1 lncRNA downstream 181691 11480106 ~ 11481227 (-) True LOC122360676
TU164553 lncRNA downstream 329256 11333175 ~ 11333662 (-) False LOC122360600
TU164770 lncRNA upstream 107645 11773919 ~ 11774181 (-) True G111623
TU164772 lncRNA upstream 114513 11780787 ~ 11781172 (-) True G111625
XR_006252803.1 lncRNA upstream 117421 11783695 ~ 11784334 (-) True LOC122360397
TU164789 lncRNA upstream 152185 11818459 ~ 11819778 (-) True G111639
TU164803 lncRNA upstream 199406 11865680 ~ 11867315 (-) False LOC122361049
XM_043261454.1 mRNA downstream 686 11653213 ~ 11662232 (-) True hibadhb
XM_043261455.1 mRNA downstream 14049 11646850 ~ 11648869 (-) True hoxa13b
XM_043260441.1 mRNA downstream 21409 11639005 ~ 11641509 (-) False hoxa11b
XM_043260440.1 mRNA downstream 21409 11639005 ~ 11641509 (-) True hoxa11b
XM_043261172.1 mRNA downstream 26569 11633490 ~ 11636349 (-) False hoxa10b
XM_043261757.1 mRNA upstream 21021 11687295 ~ 11704828 (-) True jazf1b
XM_043260991.1 mRNA upstream 108700 11774974 ~ 11779980 (-) True cpvl
XM_043260955.1 mRNA upstream 154513 11820787 ~ 11823551 (-) True fkbp14
XM_043260860.1 mRNA upstream 173627 11839901 ~ 11854994 (-) False colq
XM_043260859.1 mRNA upstream 173627 11839901 ~ 11854816 (-) True colq
TU164609 other downstream 251141 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 376486 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 779707 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 796490 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 914618 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 1987786 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 2568280 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 3243051 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 3802206 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 3802206 15468480 ~ 15496375 (-) False rps19

Expression Profile