RNA id: TU164863


Basic Information

Item Value
RNA id TU164863
length 563
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G111688
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12075597 ~ 12076159 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGGGCTGTTTTAACTACAAGATTCCTGAAATCTGCCCATTTAATGACTTCACGTCTCAGCCAGAAGAAGAGTGAAGTCAGCTGAAAGTACTCATCGGAGTAAAACAAattggcaataaaaacaaaatgggtttaaataatcatttaaacagCATTATCCTCGCAAAAAAGAACACTTCAGCATACTTCAAAAAGAGTACTTGGTAtggaatatataaaaatatatacttttgcGCAAATTTTTGGAGACATCTGCAtagaaattgtaattaaataaaagtgtattcatttgaatttatgtTGCTGGGGTACATTTATAGCAATAGTAAAACATATATTGTATCATTGTGTCCAAAttatcgatttttcttttatgccaaaatcatttttactgtaaatatataaaaacttcctttttggttagaacttcatttggacgaatttaaaggcaattttcttgCACCCtcaaattcaatattttgtatctcggccaaatatagtccatacatcaacggaaagcttatttattcagatttcagatgatgtataaaactcaattttga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164845 lncRNA downstream 40471 12032593 ~ 12035126 (-) True G111680
TU164826 lncRNA downstream 91951 11983379 ~ 11983646 (-) True G111668
TU164819 lncRNA downstream 131642 11942364 ~ 11943955 (-) True G111661
TU164803 lncRNA downstream 208282 11865680 ~ 11867315 (-) False LOC122361049
TU164789 lncRNA downstream 255819 11818459 ~ 11819778 (-) True G111639
TU164864 lncRNA upstream 294 12076453 ~ 12077007 (-) True G111689
TU164865 lncRNA upstream 4493 12080652 ~ 12080853 (-) True G111690
TU164891 lncRNA upstream 61302 12137461 ~ 12137772 (-) True G111712
TU164892 lncRNA upstream 63018 12139177 ~ 12139530 (-) True G111713
TU164895 lncRNA upstream 74383 12150542 ~ 12150877 (-) True G111716
XM_043260276.1 mRNA downstream 34650 12035907 ~ 12040947 (-) False sp8b
XM_043260274.1 mRNA downstream 36523 12035907 ~ 12039074 (-) True sp8b
XM_043260275.1 mRNA downstream 36791 12035907 ~ 12038806 (-) False sp8b
XM_043261777.1 mRNA downstream 62653 12007457 ~ 12012944 (-) False macc1
XM_043261778.1 mRNA downstream 62892 12007457 ~ 12012705 (-) True macc1
XM_043260841.1 mRNA upstream 79611 12155770 ~ 12203088 (-) False rapgef5b
XM_043260840.1 mRNA upstream 79611 12155770 ~ 12203088 (-) False rapgef5b
XM_043260838.1 mRNA upstream 79611 12155770 ~ 12203088 (-) True rapgef5b
XM_043260393.1 mRNA upstream 131946 12208105 ~ 12214349 (-) True si:ch211-254p10.2
XM_043260341.1 mRNA upstream 140697 12216856 ~ 12226949 (-) True slc6a19b
TU164609 other downstream 663820 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 789165 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 1192386 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 1209169 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 1327297 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 1577901 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 2158395 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 2833166 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 3392321 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 3392321 15468480 ~ 15496375 (-) False rps19

Expression Profile