RNA id: TU164892



Basic Information


Item Value
RNA id TU164892
length 354
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G111713
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12139177 ~ 12139530 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGGCCTTTCACGCATGACCACCTGCCCCAGTAGCTGTTCCTCCAGCCCAGCCCGGGTCACTGTGAAGTTTATAAGTGTGGTCTGGGCCTGCAGCTCCGGGGGGAAGTGAGGGTTGGCTTGCTTAGTGTGTAGAAGGAGACGGAAACCGCTTTTATACTCGCACTCCTTATCACCTAGTCTGATGTACCTGTAGAAACACCACACTATGTTACAAATTCAGAATGTGACTGCGCTAAATGACACTAAACAGCactctgtgaaaaaaaaaagctgagaaaAAAGAGCCGAAAAAAGCATTTCCACCCGTACTAGACACCAACACGTCTAATTGAAGCAAACAGAAAAGCATGACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164891 lncRNA downstream 1405 12137461 ~ 12137772 (-) True G111712
TU164865 lncRNA downstream 58324 12080652 ~ 12080853 (-) True G111690
TU164864 lncRNA downstream 62170 12076453 ~ 12077007 (-) True G111689
TU164863 lncRNA downstream 63018 12075597 ~ 12076159 (-) True G111688
TU164845 lncRNA downstream 104051 12032593 ~ 12035126 (-) True G111680
TU164895 lncRNA upstream 11012 12150542 ~ 12150877 (-) True G111716
TU164952 lncRNA upstream 224255 12363785 ~ 12365982 (-) False rxrbb
TU164932 lncRNA upstream 227259 12366789 ~ 12368614 (-) False rxrbb
TU164931 lncRNA upstream 227440 12366970 ~ 12368614 (-) False rxrbb
TU165001 lncRNA upstream 297895 12437425 ~ 12439653 (-) True G111788
XM_043260276.1 mRNA downstream 98230 12035907 ~ 12040947 (-) False sp8b
XM_043260274.1 mRNA downstream 100103 12035907 ~ 12039074 (-) True sp8b
XM_043260275.1 mRNA downstream 100371 12035907 ~ 12038806 (-) False sp8b
XM_043261777.1 mRNA downstream 126233 12007457 ~ 12012944 (-) False macc1
XM_043261778.1 mRNA downstream 126472 12007457 ~ 12012705 (-) True macc1
XM_043260841.1 mRNA upstream 16240 12155770 ~ 12203088 (-) False rapgef5b
XM_043260840.1 mRNA upstream 16240 12155770 ~ 12203088 (-) False rapgef5b
XM_043260838.1 mRNA upstream 16240 12155770 ~ 12203088 (-) True rapgef5b
XM_043260393.1 mRNA upstream 68575 12208105 ~ 12214349 (-) True si:ch211-254p10.2
XM_043260341.1 mRNA upstream 77326 12216856 ~ 12226949 (-) True slc6a19b
TU164609 other downstream 727400 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 852745 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 1255966 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 1272749 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 1390877 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 1514530 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 2095024 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 2769795 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 3328950 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 3328950 15468480 ~ 15496375 (-) False rps19

Expression Profile