RNA id: TU164895



Basic Information


Item Value
RNA id TU164895
length 336
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G111716
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12150542 ~ 12150877 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTTCAGTCCCAGGTCCAGCTCTGTTAATGATCTGTGTATCTCTGCCAGCAGCACATTCATTCGCTCACACTCCTGCAGACACACCAGGATGTAGGGGCTCCTCTCGGCCGTTTTAGACATGAGCTCTGCCAGATCATACTCTTCTGGTAACTTCTCCAGCATGTCATCCAGAACACTCTTCACCTGaccaaggggaaaaaaaagaactgagTATCAAAAGTGACTGTACATTCTAAATACTGCTTTCTAAAAGaatcaaaagtttttttgcTGCCATATaggataaatatttaattcacttGTCGAAAATGGTTAGTTCACTAGGTTAGTAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU164892 lncRNA downstream 11012 12139177 ~ 12139530 (-) True G111713
TU164891 lncRNA downstream 12770 12137461 ~ 12137772 (-) True G111712
TU164865 lncRNA downstream 69689 12080652 ~ 12080853 (-) True G111690
TU164864 lncRNA downstream 73535 12076453 ~ 12077007 (-) True G111689
TU164863 lncRNA downstream 74383 12075597 ~ 12076159 (-) True G111688
TU164952 lncRNA upstream 212908 12363785 ~ 12365982 (-) False rxrbb
TU164932 lncRNA upstream 215912 12366789 ~ 12368614 (-) False rxrbb
TU164931 lncRNA upstream 216093 12366970 ~ 12368614 (-) False rxrbb
TU165001 lncRNA upstream 286548 12437425 ~ 12439653 (-) True G111788
TU165002 lncRNA upstream 288909 12439786 ~ 12440874 (-) True G111789
XM_043260276.1 mRNA downstream 109595 12035907 ~ 12040947 (-) False sp8b
XM_043260274.1 mRNA downstream 111468 12035907 ~ 12039074 (-) True sp8b
XM_043260275.1 mRNA downstream 111736 12035907 ~ 12038806 (-) False sp8b
XM_043261777.1 mRNA downstream 137598 12007457 ~ 12012944 (-) False macc1
XM_043261778.1 mRNA downstream 137837 12007457 ~ 12012705 (-) True macc1
XM_043260841.1 mRNA upstream 4893 12155770 ~ 12203088 (-) False rapgef5b
XM_043260840.1 mRNA upstream 4893 12155770 ~ 12203088 (-) False rapgef5b
XM_043260838.1 mRNA upstream 4893 12155770 ~ 12203088 (-) True rapgef5b
XM_043260393.1 mRNA upstream 57228 12208105 ~ 12214349 (-) True si:ch211-254p10.2
XM_043260341.1 mRNA upstream 65979 12216856 ~ 12226949 (-) True slc6a19b
TU164609 other downstream 738765 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 864110 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 1267331 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 1284114 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 1402242 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 1503183 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 2083677 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 2758448 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 3317603 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 3317603 15468480 ~ 15496375 (-) False rps19

Expression Profile