Item | Value |
---|---|
RNA id | XM_043260342.1 |
length | 5692 |
RNA type | mRNA |
GC content | 0.40 |
exon number | 11 |
gene id | rxrbb |
representative | False |
Item | Value |
---|---|
chromosome id | NC_056714.1 |
NCBI id | CM032083.1 |
chromosome length | 28146790 |
location | 12363785 ~ 12378449 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
species | tiger barb (Puntius tetrazona) |
id | name | namespace |
---|---|---|
GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003707 | steroid hormone receptor activity | molecular_function |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | molecular_function |
GO:0008270 | zinc ion binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU164895 | lncRNA | downstream | 214673 | 12150542 ~ 12150877 (-) | True | G111716 |
TU164892 | lncRNA | downstream | 226020 | 12139177 ~ 12139530 (-) | True | G111713 |
TU164891 | lncRNA | downstream | 227778 | 12137461 ~ 12137772 (-) | True | G111712 |
TU164865 | lncRNA | downstream | 284697 | 12080652 ~ 12080853 (-) | True | G111690 |
TU164864 | lncRNA | downstream | 288543 | 12076453 ~ 12077007 (-) | True | G111689 |
TU165001 | lncRNA | upstream | 58986 | 12437425 ~ 12439653 (-) | True | G111788 |
TU165002 | lncRNA | upstream | 61347 | 12439786 ~ 12440874 (-) | True | G111789 |
TU165007 | lncRNA | upstream | 63514 | 12441953 ~ 12442613 (-) | True | G111791 |
TU165033 | lncRNA | upstream | 100995 | 12479434 ~ 12479788 (-) | True | G111806 |
TU165034 | lncRNA | upstream | 102285 | 12480724 ~ 12480975 (-) | True | G111807 |
XM_043260341.1 | mRNA | downstream | 138601 | 12216856 ~ 12226949 (-) | True | slc6a19b |
XM_043260393.1 | mRNA | downstream | 151201 | 12208105 ~ 12214349 (-) | True | si:ch211-254p10.2 |
XM_043260841.1 | mRNA | downstream | 162462 | 12155770 ~ 12203088 (-) | False | rapgef5b |
XM_043261441.1 | mRNA | upstream | 14328 | 12392767 ~ 12397250 (-) | True | LOC122360649 |
XM_043260450.1 | mRNA | upstream | 40679 | 12419118 ~ 12422119 (-) | True | LOC122360109 |
XM_043261760.1 | mRNA | upstream | 113059 | 12491498 ~ 12497557 (-) | True | ccdc12 |
XM_043260442.1 | mRNA | upstream | 199422 | 12577861 ~ 12599994 (-) | True | setd2 |
XM_043261936.1 | mRNA | upstream | 427789 | 12806228 ~ 12825561 (-) | False | LOC122361014 |
TU164609 | other | downstream | 953773 | 11410678 ~ 11411777 (-) | True | G111490 |
TU164545 | other | downstream | 1079118 | 11270664 ~ 11286432 (-) | False | G111450 |
TU164396 | other | downstream | 1482339 | 10861951 ~ 10883211 (-) | False | LOC122360812 |
TU164397 | other | downstream | 1499122 | 10861951 ~ 10866428 (-) | False | LOC122360812 |
TU164366 | other | downstream | 1617250 | 10746793 ~ 10748300 (-) | False | LOC122361037 |
TU165859 | other | upstream | 1275621 | 13654060 ~ 13683909 (-) | True | zgc:92606 |
TU166030 | other | upstream | 1856115 | 14234554 ~ 14301619 (-) | True | G112478 |
XR_006252733.1 | other | upstream | 2530886 | 14909325 ~ 14913646 (-) | False | LOC122359907 |
TU167048 | other | upstream | 3090041 | 15468480 ~ 15496375 (-) | False | rps19 |
TU167050 | other | upstream | 3090041 | 15468480 ~ 15496375 (-) | False | rps19 |