RNA id: TU165034



Basic Information


Item Value
RNA id TU165034
length 252
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G111807
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 12480724 ~ 12480975 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATTTTCAGACGATGGGCTCTGCTGCTGAGCGATCACATCCTCCAGGCTGTTAATCACACTGTTCTTGTCTCTGAGGCGCTGGCGGTAGGAGGCACGCAGGGCCTTCATTTTCCTCCGGTGCTGGACGCGGTGTCTGCGCAGCTGCAGACGGTACTGATCCGCCTGCTGCTGCAGCTGTTGCAGGTGAGAATATTGCTCCAGGAAACTCAGGAGGTGTGACATCACGGACAGCAATGGAGACTCTGTCACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU165033 lncRNA downstream 936 12479434 ~ 12479788 (-) True G111806
TU165007 lncRNA downstream 38111 12441953 ~ 12442613 (-) True G111791
TU165002 lncRNA downstream 39850 12439786 ~ 12440874 (-) True G111789
TU165001 lncRNA downstream 41071 12437425 ~ 12439653 (-) True G111788
TU164932 lncRNA downstream 112110 12366789 ~ 12368614 (-) False rxrbb
TU165036 lncRNA upstream 5876 12486851 ~ 12487693 (-) True G111809
TU165016 lncRNA upstream 8807 12489782 ~ 12490120 (-) True G111799
TU165116 lncRNA upstream 76836 12557811 ~ 12611994 (-) True G111860
TU165120 lncRNA upstream 86230 12567205 ~ 12624619 (-) False G111862
TU165121 lncRNA upstream 86230 12567205 ~ 12652406 (-) True G111862
XM_043260450.1 mRNA downstream 58605 12419118 ~ 12422119 (-) True LOC122360109
XM_043261441.1 mRNA downstream 83474 12392767 ~ 12397250 (-) True LOC122360649
XM_043260346.1 mRNA downstream 102284 12365550 ~ 12378440 (-) False rxrbb
XM_043261760.1 mRNA upstream 10523 12491498 ~ 12497557 (-) True ccdc12
XM_043260442.1 mRNA upstream 96886 12577861 ~ 12599994 (-) True setd2
XM_043261936.1 mRNA upstream 325253 12806228 ~ 12825561 (-) False LOC122361014
XM_043261935.1 mRNA upstream 325253 12806228 ~ 12825561 (-) True LOC122361014
XM_043261932.1 mRNA upstream 358086 12839061 ~ 12944070 (-) False col14a1a
TU164609 other downstream 1068947 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 1194292 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 1597513 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 1614296 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 1732424 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 1173085 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 1753579 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 2428350 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 2987505 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 2987505 15468480 ~ 15496375 (-) False rps19

Expression Profile