RNA id: TU165807



Basic Information


Item Value
RNA id TU165807
length 282
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G112339
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13455557 ~ 13461725 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TACCTGACGGCGAGTTTCTGTCCTTCGACTCAATTTTGAAATCTTTCTTTTCCTCGTCAGATGAGAATGTGCTGTCCCTTCAATCCGGGCAGCATCCATCGACTGTCCTCGCACACTCCTTTTCTCCTTCCTGCACTCGTTTACTCCCCACTGTTTCTCTGCTGCTCTCACAGGTCGACCGCAATGGAGAAGCTTGTGTTGATGCCTTCGTGTGTGGGTATAGTCTTACTTCGCGTCAGTTCTGGTCATTGCTGATAAAAAAAAATACCTTTTAtagttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU165802 lncRNA downstream 8379 13440670 ~ 13447178 (-) True G112336
TU165763 lncRNA downstream 21262 13431144 ~ 13434295 (-) True G112315
TU165746 lncRNA downstream 163134 13289205 ~ 13292423 (-) True G112299
TU165689 lncRNA downstream 205933 13217203 ~ 13249624 (-) True G112260
TU165691 lncRNA downstream 227739 13213930 ~ 13227818 (-) True G112261
TU165828 lncRNA upstream 72996 13534721 ~ 13543311 (-) True G112350
TU165843 lncRNA upstream 144906 13606631 ~ 13609334 (-) True G112361
TU165864 lncRNA upstream 156962 13618687 ~ 13619336 (-) True G112377
TU165875 lncRNA upstream 186902 13648627 ~ 13736231 (-) True G112385
TU165880 lncRNA upstream 197280 13659005 ~ 13659470 (-) True G112390
XM_043261089.1 mRNA downstream 135794 13306028 ~ 13319763 (-) True pitpnc1b
XM_043260047.1 mRNA downstream 250960 13201382 ~ 13204597 (-) True josd2
XM_043261894.1 mRNA downstream 284573 13162930 ~ 13170984 (-) True flcn
XM_043261899.1 mRNA downstream 292773 13158802 ~ 13162784 (-) False zgc:174888
XM_043260540.1 mRNA upstream 11750 13473475 ~ 13485710 (-) True cacng6b
XM_043260533.1 mRNA upstream 25626 13487351 ~ 13494251 (-) False u2af2a
XM_043260532.1 mRNA upstream 25626 13487351 ~ 13494237 (-) True u2af2a
XM_043260536.1 mRNA upstream 25626 13487351 ~ 13494231 (-) False u2af2a
XM_043260534.1 mRNA upstream 25626 13487351 ~ 13494231 (-) False u2af2a
TU164609 other downstream 2043780 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 2169125 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 2572346 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 2589129 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 2707257 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 192335 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 772829 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 1447600 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 2006755 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 2006755 15468480 ~ 15496375 (-) False rps19

Expression Profile