RNA id: TU165899


Basic Information

Item Value
RNA id TU165899
length 588
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id LOC122360145
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13713860 ~ 13789086 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

caatatataatatttagctgtttttttgtgatttagtgACATTTACTTCATTAAACATTTGCAGAAACAGAAGGGTAGGAAGGTGGAGCTTAGCTCTAAAAGCGATGATGTCACAATAGCCACTATCCAATCAGGGGGAGGCACGAAGGAGACtagtgtctgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtaaggCGTTATACAACATGGGCGTTTCGAGTAAGAACACTCTAATCCGCACATCCTACAtctcattttctttccttctgtCATTATTATATCTGGGTTCTCTTGGTAGTGAATATATTTGATGAAGAAGTGCTTTTACATGGTGCGTCAGTTCAGAAGCAGGAGTCTGGGCCTACGGTTTCAGTAGATCAGATacagatgagtgtgtgtgtgtgtgtgtgtaagagagagagaggaaaatgcTATTCTATTTTACTCTATTCCACCACTCTTCGGTAAAAGTACAGGTAGCCCAGGTCCTTAGGTGGTTTCTCAGAGGCACAAACTTTCTGATCATTAAAGATGACCCACCTAAAAGAAGCAAAGAGtgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU165855 lncRNA downstream 1678 13777269 ~ 13778805 (-) True G112369
TU165875 lncRNA downstream 44252 13648627 ~ 13736231 (-) True G112385
TU165977 lncRNA upstream 111778 13900864 ~ 13901076 (-) True G112447
TU165978 lncRNA upstream 112051 13901137 ~ 13901613 (-) True G112448
TU165979 lncRNA upstream 120238 13909324 ~ 13909736 (-) True G112449
TU166006 lncRNA upstream 321062 14110148 ~ 14110462 (-) True G112464
TU166021 lncRNA upstream 419310 14208396 ~ 14210533 (-) True G112473
XM_043260503.1 mRNA downstream 9697 13764004 ~ 13770786 (-) True p3h3
XM_043260508.1 mRNA downstream 20140 13753414 ~ 13760343 (-) False gnb3a
XM_043261065.1 mRNA upstream 46434 13835520 ~ 13838704 (-) False cxcr3.3
XM_043261066.1 mRNA upstream 46434 13835520 ~ 13838704 (-) True cxcr3.3
XM_043262053.1 mRNA upstream 52222 13841308 ~ 13844368 (-) True cxcr3.2
XM_043261098.1 mRNA upstream 77294 13866380 ~ 13875529 (-) False ceacam1
XM_043261097.1 mRNA upstream 77294 13866380 ~ 13875529 (-) True ceacam1
TU165859 other downstream 96574 13654060 ~ 13683909 (-) True zgc:92606
TU164609 other downstream 2368706 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 2494051 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 2897272 10861951 ~ 10883211 (-) False LOC122360812
TU166030 other upstream 445468 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 1120239 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 1679394 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 1679394 15468480 ~ 15496375 (-) False rps19
TU167051 other upstream 1679394 15468480 ~ 15495722 (-) False rps19

Expression Profile