RNA id: TU165977



Basic Information


Item Value
RNA id TU165977
length 213
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G112447
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13900864 ~ 13901076 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTGAATTCTAAATTAtgaaaatctcatttttatGTGGTGCTCAGAGTTTTGTCAAACTTAAGTGTTTCTGAATTTTAGTGAATTCTCTTAACATTTGATTagtgatatttaaaacagtaaaagaacCACAGTAACTACAATAAGTGATATAcatgtttataaatgattttgtgAGACAGAAATGTTGTAAAGACAACTAGTTGTAACAAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU165898 lncRNA downstream 111778 13713860 ~ 13789086 (-) True LOC122360145
TU165896 lncRNA downstream 111778 13779995 ~ 13789086 (-) False LOC122360145
TU165894 lncRNA downstream 111778 13780483 ~ 13789086 (-) False LOC122360145
TU165895 lncRNA downstream 111778 13780483 ~ 13789086 (-) False LOC122360145
TU165897 lncRNA downstream 111778 13780483 ~ 13789086 (-) False LOC122360145
TU165978 lncRNA upstream 61 13901137 ~ 13901613 (-) True G112448
TU165979 lncRNA upstream 8248 13909324 ~ 13909736 (-) True G112449
TU166006 lncRNA upstream 209072 14110148 ~ 14110462 (-) True G112464
TU166021 lncRNA upstream 307320 14208396 ~ 14210533 (-) True G112473
TU166022 lncRNA upstream 309617 14210693 ~ 14210939 (-) True G112474
XM_043260367.1 mRNA downstream 1049 13894615 ~ 13899815 (-) True LOC122360057
XM_043261099.1 mRNA downstream 13346 13881158 ~ 13887518 (-) True LOC122360471
XM_043261098.1 mRNA downstream 25335 13866380 ~ 13875529 (-) False ceacam1
XM_043261097.1 mRNA downstream 25335 13866380 ~ 13875529 (-) True ceacam1
XM_043262053.1 mRNA downstream 56496 13841308 ~ 13844368 (-) True cxcr3.2
XM_043261949.1 mRNA upstream 9427 13910503 ~ 13971229 (-) False grik5
XM_043261947.1 mRNA upstream 9427 13910503 ~ 13971226 (-) False grik5
XM_043261946.1 mRNA upstream 9427 13910503 ~ 13971226 (-) False grik5
XM_043261944.1 mRNA upstream 9427 13910503 ~ 13971226 (-) False grik5
XM_043261945.1 mRNA upstream 9427 13910503 ~ 13971226 (-) True grik5
TU165859 other downstream 216955 13654060 ~ 13683909 (-) True zgc:92606
TU164609 other downstream 2489087 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 2614432 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 3017653 10861951 ~ 10883211 (-) False LOC122360812
TU166030 other upstream 333478 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 1008249 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 1567404 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 1567404 15468480 ~ 15496375 (-) False rps19
TU167051 other upstream 1567404 15468480 ~ 15495722 (-) False rps19

Expression Profile