RNA id: TU166022



Basic Information


Item Value
RNA id TU166022
length 247
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G112474
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14210693 ~ 14210939 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gagagagagagagagagagagagagagagagagagagaaagagagagaaagagagagactttgACATTCCACtgctaatataattttattcagttttatgctaataaaggatgcattttttttaaaaaacacagtaaaagtgATACAGTCAAAcataattagaatttaaaatcattaatactgtttttacattttaataaatttagaaatctcatttattcatgtgattgAAAGATAGAATTTTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU166021 lncRNA downstream 160 14208396 ~ 14210533 (-) True G112473
TU166006 lncRNA downstream 100231 14110148 ~ 14110462 (-) True G112464
TU165979 lncRNA downstream 300957 13909324 ~ 13909736 (-) True G112449
TU165978 lncRNA downstream 309080 13901137 ~ 13901613 (-) True G112448
TU165977 lncRNA downstream 309617 13900864 ~ 13901076 (-) True G112447
TU166033 lncRNA upstream 81800 14292739 ~ 14296572 (-) True G112479
TU166037 lncRNA upstream 92185 14303124 ~ 14303535 (-) True G112483
TU166260 lncRNA upstream 117013 14327952 ~ 14328203 (-) True G112612
TU166305 lncRNA upstream 287587 14498526 ~ 14498744 (-) False dicp3.3
TU166339 lncRNA upstream 371540 14582479 ~ 14583312 (-) False LOC122359961
XM_043261522.1 mRNA downstream 2476 14187241 ~ 14208217 (-) True atp1a3b
XM_043259993.1 mRNA downstream 28588 14171168 ~ 14182105 (-) False dedd1
XM_043261789.1 mRNA upstream 9100 14220039 ~ 14289830 (-) False si:ch73-22o12.1
XM_043261788.1 mRNA upstream 42322 14253261 ~ 14289830 (-) True si:ch73-22o12.1
XM_043261533.1 mRNA upstream 102950 14313889 ~ 14324941 (-) True vars1
XM_043261603.1 mRNA upstream 114719 14325658 ~ 14329605 (-) True LOC122360758
XM_043261605.1 mRNA upstream 116622 14327561 ~ 14334066 (-) True ino80e
TU165859 other downstream 526784 13654060 ~ 13683909 (-) True zgc:92606
TU164609 other downstream 2798916 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 2924261 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 3327482 10861951 ~ 10883211 (-) False LOC122360812
TU166030 other upstream 23615 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 698386 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 1257541 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 1257541 15468480 ~ 15496375 (-) False rps19
TU167051 other upstream 1257541 15468480 ~ 15495722 (-) False rps19

Expression Profile