RNA id: TU167211


Basic Information

Item Value
RNA id TU167211
length 2557
lncRNA type inter_gene
GC content 0.41
exon number 6
gene id G113234
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15929222 ~ 15958664 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tatagagcacagatatatatatatatatatatatatatatatacacagagtCACCATCAGACATATTCAAcccataattttacaaaaaaaaaacatctcttgtACACAAGATGGCAGTAAAAAATCTTGTTAGCCGATGATAAATTGTGGATTATATCAACAATACCAATAACTTCTTGTTATTTATAGatcttgttttttgtaattctttGCCAAGTATGTTCTTCAAATACCAAAGATAACATAGTAAGCATAGAAATTACTTACTGAAAGAAGATCCAAAACAGGCAAAAGTTAAAGTTACTGTAATAAATTCACTATAGGATCTATataaacactttattaaatCGATTCCTGTATTATAAAGCTGAATTAATATGATTCAGaagttttattcagaaagaacCATTTGCAAACGAATGACCGCTTTTAAGTTTATGACCACTCAGAATAAGGCACCTTGGATGAGTTTACACTTCAGATCTGCTTACAACATATTGGTGTATTTATTGTTTAGAAAAACAAAGCAGGTTTAAATTGCAAACCACTGAGAAtatcaaatgtataaaagtgaaaaaaaaaagtacttagAAAAGTATTGCACACCAGTGTTAAGGCCATTTTGGTAAACATTCCCATGCACTTGCTAAAGCACCAATTATGCCatctaataaatgtttgtgttgcCAAAAATCAAACCTATATTACATTCACAGAAGAAACCAGTGCATCCTGACAGCATAAGGGCaacatattttatgcatgtaGGATCAATTTAAACATCCTTTTCCTTAACCTTATTATAACCTCTCTTAAGTAAACAAGATccatgctgaataaataaaaaaaatcctttataaatacacagatcCCCAACACAGCTTTTTAGTTTATCTCCTTGCATATTTTGAGTACATTCGGTTTCCAAACTTCTCCACAAAACATTATGACACCTGCTTCTAATTTTTTCCCCTGCCTCAAGTCATCCAGGAATCCTTTGCACTATTGACACTATTTACAGGGCAGCAATGCAACGCCTCCTAAAACTTGAAAAGGTTGATGAAACCCTGTGGAGACACGGCCTTGCAGCAGCTCTCCGGGTTATTGGCAGTGCAAGGATGGTTTGTACCTTCCAGAACAGGATGTGGCAATGTGTGCAGAACTGTAATGTGTCACTGTACTGCTCTTTGTGAGGGTAACACCGGCATAActtaaaatacatctttttCCACTCCAAATGTCCTTTATCCGACACCATTAGGCGCTTGCGGATCTGCGAAGAACATACCAAATGACTTTAACCAAATTTAGCGCAAGATTTACCTTATAAACAGCCACATAAATATGCAAGTTCTTCAAGCAAGTGTGTTGCATTCCATCTGAAGAGCCACAGACGTCTGTCTACCTGTCTGTCTGAGAAGTGATACTGGCAGAGTTTCTTCCACAACAGCCGATCTTCTGTCAGCACGCTCAGGTCAGGGCATACCTGACCCAGGCTAACCAGATCTCGTCCGTCTGAGAGATGGTGCATGATGTTGAGCTGTAAGCTAGCCGGAAGATCGAGCAAGGTCATCCCTGTGTTTGTGCCTGTTGATCTGAATGTTGTCAAGCTGCTGCTGCCACTGCAGTATGTTCTCCATGCGATGCACCCAGATGTTGATGTTTCCCACCAGGACGGACTTGCCCATGTCCTGAACCAGACTGCACAACGACGCATACAGCGTTTGCAGCAGTTCCTTAATCGGTCGAACATGTAGTTTTTCTGTGCCACTCCACTCAGCGAAGGCAGTTGGGACTTGGCGATCAGCTCCACACCCTTACGACATAATTGAATCGCCTGGTGTCCTTGATGGCACTGCAGAAGTCCAAGCGATTAAATGCTTCGCCCAGAGTACAATATCCATGACGCTGCGTGAAATGATCAAAGAGGAGTTAGCCGACTACTAATTCCCACTCTGTCGTACTGCAGTAGATCGCACGCCTTACCTCTTTGGTGCTCCCTTTGTGGACATAAATCCATTTGTCTTTGTGAAAATCTGCAGAGAAGAAATGAGTCAAGATTTCTGCACTTACAGCGGTCCGAATGTCACGAAGAAGCGGTGACGATACTCACAAGGAATCTTTGTGTTGTTATTCAGCAAGTCCTTCTTTCGCTTCTTTGCAGCCACATCATAATTAATGCTGAGGATCAAATTCTCCTTGTCATGCTCGTCTTTGCAGTTACCTCTTTCGTTCTGAAACATTGTTATTCGTGTCGTTGTCATCTTTCGTCGTTTTTTTCCACCCGTCCTCGGTTTTCACCCAGCTTTGACCAGGAGACCGCCAGTCTTGTCCAAGAAACGGCATTGTCAAGACGCGAAAACCAGTGACGACTGAAGGCGATTTGTTAGCGTTAGACTCGAGAAGCCGCTGAAGTGATTTTCTTGCGTGTTAACCGCTATATTATATCATGTCGCGAGCGCGTTTCTGATGATAAAAGTGCGcagctgtatttatattgtcagAAGGAGAATCCGGAAATGTTCCTGGTCCCGCCCCCTTTGGACCGCGTTCTCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU167216 lncRNA downstream 4745 15911312 ~ 15946683 (-) True G113236
TU167204 lncRNA downstream 42755 15907099 ~ 15908673 (-) True G113231
TU167205 lncRNA downstream 44598 15906233 ~ 15906830 (-) True G113232
TU167138 lncRNA downstream 187683 15763469 ~ 15763745 (-) True G113187
TU167117 lncRNA downstream 233542 15709738 ~ 15717886 (-) True G113168
TU167227 lncRNA upstream 6094 15964758 ~ 15967193 (-) True G113244
XR_006252813.1 lncRNA upstream 26077 15984741 ~ 15986184 (-) True LOC122360541
TU167258 lncRNA upstream 46194 16004858 ~ 16006374 (-) False adnp2a
XR_006252851.1 lncRNA upstream 107502 16066166 ~ 16067545 (-) True LOC122361072
TU167287 lncRNA upstream 161662 16120326 ~ 16196677 (-) True G113281
XM_043260718.1 mRNA downstream 12538 15936647 ~ 15938890 (-) True lratd2b
XM_043260373.1 mRNA downstream 82217 15867304 ~ 15869211 (-) True prss1
XM_043260368.1 mRNA downstream 146726 15799086 ~ 15804702 (-) True has1
XM_043260584.1 mRNA downstream 191761 15754181 ~ 15759667 (-) True si:dkey-79d12.5
XM_043260582.1 mRNA downstream 197518 15735273 ~ 15753910 (-) True kcnn4
XM_043260914.1 mRNA upstream 1005 15959669 ~ 15963708 (-) False prelid3a
XM_043260913.1 mRNA upstream 1005 15959669 ~ 15963708 (-) True prelid3a
XM_043261263.1 mRNA upstream 39648 15998312 ~ 16000648 (-) True rbfa
XM_043260048.1 mRNA upstream 42649 16001313 ~ 16006471 (-) True adnp2a
XM_043261540.1 mRNA upstream 111875 16070539 ~ 16103655 (-) True LOC122360718
TU167180 other downstream 89535 15857599 ~ 15861893 (-) True G113220
TU167155 other downstream 132342 15816979 ~ 15819086 (-) True G113203
TU167050 other downstream 455053 15468480 ~ 15496375 (-) False rps19
TU167269 other upstream 54300 16012964 ~ 16013751 (-) True G113275
TU167253 other upstream 180655 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 259997 16218661 ~ 16228466 (-) False atxn1b
XR_006252795.1 other upstream 274308 16232972 ~ 16239506 (-) False fam8a1b
TU167506 other upstream 721533 16680197 ~ 16682178 (-) False esrp1

Expression Profile