RNA id: TU167269



Basic Information


Item Value
RNA id TU167269
length 587
RNA type TUCP
GC content 0.45
exon number 3
gene id G113275
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16012964 ~ 16013751 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ataaaataccatGTTGTAAATGACAAGCAGACTTATCGAGCGAACATTCAGCCTGCGATCGACTGCGACACAAGtgGTTATGGAGAAACCGTATATATTAGCTACCACACTTGGAGCGCCAGGAGGCATCTACGAGTGTTTTGCACCGTTTATCGAGAAACACTTCACTATAGTCCCATATGAGAGGTTTGTACAGAGCAAAGGACACTCGGCTGACAAAATCCAGGCAGTGTTTGTTTGGGGTAAAACATTAAAGGTTGACCAAAACCTGCTACAGTCTTTGCCCAACCTCAAAGCTGTGGTCAATGGTGGGGTAGGAGTAGACCACCTTGACATTCCCCTGATCAATAGCTTTGGAGTCAAAGTTTCCAACACACCTCATGTGGTGGATAATGCTACTGCAGATATTGGCATGAGTTTGATGTTGGCATCTGCAAGGAAGATTGTTGAAGGACACATTTTTTCCAAGTCCAGAGAGTCTGATGATTTCCCAGAGTCCTCTCTGGGCACTGATGTTTCTGGAGGCACCCTGGGCATAATTGGCATGGGTAGAATAGGATACAAAATAGCCCAGAGAGCTCAAGGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU167258 lncRNA downstream 6590 16004858 ~ 16006374 (-) False adnp2a
XR_006252813.1 lncRNA downstream 26780 15984741 ~ 15986184 (-) True LOC122360541
TU167227 lncRNA downstream 45771 15964758 ~ 15967193 (-) True G113244
TU167209 lncRNA downstream 54300 15929222 ~ 15958664 (-) False G113234
TU167212 lncRNA downstream 54300 15939895 ~ 15958664 (-) False G113234
XR_006252851.1 lncRNA upstream 52415 16066166 ~ 16067545 (-) True LOC122361072
TU167287 lncRNA upstream 106575 16120326 ~ 16196677 (-) True G113281
TU167254 lncRNA upstream 125661 16139412 ~ 16141235 (-) False G113267
TU167319 lncRNA upstream 177111 16190862 ~ 16192689 (-) True G113300
TU167286 lncRNA upstream 180278 16194029 ~ 16195896 (-) True G113280
XM_043260048.1 mRNA downstream 6493 16001313 ~ 16006471 (-) True adnp2a
XM_043261263.1 mRNA downstream 12316 15998312 ~ 16000648 (-) True rbfa
XM_043260914.1 mRNA downstream 49256 15959669 ~ 15963708 (-) False prelid3a
XM_043260913.1 mRNA downstream 49256 15959669 ~ 15963708 (-) True prelid3a
XM_043260718.1 mRNA downstream 74074 15936647 ~ 15938890 (-) True lratd2b
XM_043261540.1 mRNA upstream 56788 16070539 ~ 16103655 (-) True LOC122360718
XM_043262054.1 mRNA upstream 135212 16148963 ~ 16152079 (-) True LOC122361095
XM_043262055.1 mRNA upstream 138753 16152504 ~ 16154388 (-) True LOC122361096
XM_043260160.1 mRNA upstream 183968 16197719 ~ 16210633 (-) False dtnbp1a
XM_043260161.1 mRNA upstream 183968 16197719 ~ 16210633 (-) False dtnbp1a
TU167180 other downstream 151071 15857599 ~ 15861893 (-) True G113220
TU167155 other downstream 193878 15816979 ~ 15819086 (-) True G113203
TU167048 other downstream 516589 15468480 ~ 15496375 (-) False rps19
TU167253 other upstream 125568 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 204910 16218661 ~ 16228466 (-) False atxn1b
XR_006252795.1 other upstream 219221 16232972 ~ 16239506 (-) False fam8a1b
TU167506 other upstream 666446 16680197 ~ 16682178 (-) False esrp1
unassigned_transcript_2159 other upstream 976551 16990302 ~ 16990374 (-) True trnat-ugu_49

Expression Profile