RNA id: TU168666


Basic Information

Item Value
RNA id TU168666
length 690
RNA type TUCP
GC content 0.53
exon number 4
gene id LOC122360940
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18684573 ~ 18698407 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

accATCCGGCGaaactgtctctgtctctccgCCACATATCGGGGGCTGGAATTAATTCAGACGCGTGTCATGTTTGGAATATTGTCGGGCTCCACTGAAAATTGCGCAAAATGGACGGAACTATCAAGGAGGCGCTGTCAGTGGTGAGTGAAGACCAGTCTCTGTTCGAGCCTCCGTACGCCGCTGCTGCTCCCTTACCCAAGACAGACATGACTGCGTCCGGCGCACAGGACTACGGTCAGCCTCACAAGATCAACCCTATCCCGCCTCAGCAGGAGTGGATCAACCCGCCCGGCCGGGTTAATGTCAAGCGAGAGTATGACCACATCAATGGATCCAGcaGAGAGTCCCCGGTGGACTGTAGTGTgggtaaatgcaataaaatggtAGGCGGGACCGACGCATCTCAGATGAGCTACACCAGCTACATGGACGAGAAGTGCGCTCCGCCCCCAAATATGACAACCAATGAGAGGAGAGTTATCGTCCCAGCAGacCCTTCTCTCTGGTCTCCAGACCATGTGCGGCAATGGTTAGACTGGGCCATTAAAGAGTATGGTCTTCAGGAGATCGACACGGCCATGTTCCACAACACAGATGGAAAAGAACTTTGCAAGATGAGCAAAGAAGACTTCCTGAGACTTACCAGCGTCTACAACACGGAGGTCCTGCTCTCACATCTCAATTACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252842.1 lncRNA downstream 5517 18687166 ~ 18688395 (-) True LOC122360941
TU168638 lncRNA downstream 144973 18548188 ~ 18548939 (-) True G114231
XR_006252807.1 lncRNA downstream 149232 18528871 ~ 18544680 (-) True LOC122360486
TU168419 lncRNA downstream 318298 18373968 ~ 18375614 (-) True G114075
TU168395 lncRNA downstream 454643 18195515 ~ 18239269 (-) False lmna
TU168682 lncRNA upstream 41438 18739754 ~ 18740829 (-) True G114259
TU168713 lncRNA upstream 114904 18813220 ~ 18821088 (-) False rpz
TU168711 lncRNA upstream 114913 18813229 ~ 18821088 (-) False rpz
XR_006252755.1 lncRNA upstream 287087 18985403 ~ 18987922 (-) True LOC122360016
XR_006252754.1 lncRNA upstream 287087 18985403 ~ 18987919 (-) False LOC122360016
XM_043261587.1 mRNA downstream 22638 18669607 ~ 18671274 (-) True LOC122360747
XM_043261559.1 mRNA downstream 31422 18653732 ~ 18662490 (-) True LOC122360727
XM_043261385.1 mRNA downstream 50623 18633238 ~ 18643289 (-) True phf20l1
XM_043261418.1 mRNA downstream 60997 18601810 ~ 18632915 (-) True tg
XM_043260127.1 mRNA downstream 94935 18596956 ~ 18598977 (-) False ccn4b
XM_043261702.1 mRNA upstream 54474 18752790 ~ 18756397 (-) True LOC122360855
XM_043261703.1 mRNA upstream 82683 18780999 ~ 18782095 (-) True rpz5
XM_043261704.1 mRNA upstream 98945 18797261 ~ 18798074 (-) True LOC122360857
XM_043261507.1 mRNA upstream 113922 18812238 ~ 18821110 (-) False rpz
XM_043261195.1 mRNA upstream 147428 18845744 ~ 18859744 (-) False nr2f5
TU168660 other downstream 22667 18669681 ~ 18671245 (-) False LOC122360747
TU168645 other downstream 43303 18649519 ~ 18650609 (-) True G114236
XR_006252779.1 other downstream 173625 18492626 ~ 18520287 (-) False mroh1
XR_006252778.1 other downstream 173625 18492626 ~ 18520287 (-) False mroh1
XR_006252805.1 other downstream 326922 18357417 ~ 18366990 (-) False slc45a4b
TU168710 other upstream 116900 18815216 ~ 18821088 (-) True rpz
TU168714 other upstream 116900 18815216 ~ 18821088 (-) False rpz
TU168715 other upstream 116900 18815216 ~ 18821088 (-) False rpz
XR_006252818.1 other upstream 718646 19416962 ~ 19421094 (-) False cd22
TU169372 other upstream 1468479 20166795 ~ 20167614 (-) False G114715