RNA id: TU169194


Basic Information

Item Value
RNA id TU169194
length 256
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G114608
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19693138 ~ 19693393 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGTTTaggtaaattatgttatttttgttttgtttacgtAAAAAGAAGTATTCTTGTAGCATTGCAAAATTAAAGTTCGAACTACTGATGTCACACGTTAGTTTTTGCATCTTAAAAATGTGGTGCTCACTGCAAAAGACTTGAGGTCATAAGTCCATCTAACGTGTTTACACGGAATAACTATAGAAAAGTCGCGCATTGGAATGAAAAGCGTGTTCTATGAAAAATGATCAGATGATGGTAAAtgtaattgaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169193 lncRNA downstream 9208 19683622 ~ 19683930 (-) True G114607
TU169080 lncRNA downstream 45339 19596432 ~ 19647799 (-) False dpys
TU169068 lncRNA downstream 49648 19602438 ~ 19643490 (-) False G114539
TU169067 lncRNA downstream 49648 19640914 ~ 19643490 (-) True G114539
TU169087 lncRNA downstream 74061 19609105 ~ 19619077 (-) True G114550
TU169197 lncRNA upstream 25793 19719186 ~ 19719936 (-) True G114611
TU169218 lncRNA upstream 266474 19959867 ~ 19971957 (-) True G114626
TU169265 lncRNA upstream 407651 20101044 ~ 20104270 (-) True G114663
TU169371 lncRNA upstream 473402 20166795 ~ 20177758 (-) True G114715
TU169376 lncRNA upstream 480770 20174163 ~ 20244153 (-) True G114718
XM_043261243.1 mRNA downstream 35414 19647572 ~ 19657724 (-) False dpys
XM_043261242.1 mRNA downstream 35415 19647572 ~ 19657723 (-) True dpys
XM_043261248.1 mRNA downstream 202405 19487757 ~ 19490733 (-) False zgc:101716
XM_043261247.1 mRNA downstream 202410 19487757 ~ 19490728 (-) True zgc:101716
XM_043260250.1 mRNA downstream 213664 19475818 ~ 19479474 (-) True upk1a
XM_043260110.1 mRNA upstream 172333 19865726 ~ 19886663 (-) True si:dkey-122a22.2
XM_043261812.1 mRNA upstream 317902 20011295 ~ 20020232 (-) True sqlea
XM_043261878.1 mRNA upstream 328851 20022244 ~ 20027005 (-) True rnf144b
XM_043261589.1 mRNA upstream 342955 20036348 ~ 20039187 (-) True ccdc127a
XM_043261591.1 mRNA upstream 346554 20039947 ~ 20041361 (-) True mrpl32
XR_006252818.1 other downstream 272044 19416962 ~ 19421094 (-) False cd22
TU168710 other downstream 872050 18815216 ~ 18821088 (-) True rpz
TU168714 other downstream 872050 18815216 ~ 18821088 (-) False rpz
TU168715 other downstream 872050 18815216 ~ 18821088 (-) False rpz
TU168666 other downstream 994822 18693912 ~ 18698316 (-) False LOC122360940
TU169372 other upstream 473402 20166795 ~ 20167614 (-) False G114715
TU169487 other upstream 748572 20441965 ~ 20452450 (-) False G114793
TU169489 other upstream 748572 20441965 ~ 20452450 (-) True G114793
TU169673 other upstream 958584 20651977 ~ 20653574 (-) True G114901
TU169801 other upstream 1319214 21012607 ~ 21017105 (-) True G115003

Expression Profile