RNA id: TU169218



Basic Information


Item Value
RNA id TU169218
length 412
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G114626
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19959867 ~ 19971957 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGAATACTCAATGGTGCCCTTCGGTCTCTGGAACGACATCCGCCTTCCATCCTTCTTCTCCGGCGTCTTCTTCTGGCCGGTATTACCTGCAGTGTGCGTTTCATGCGCGTTCTCCAGAGGCGTTTCTGCATCAGAGTAGTCTTTAAACTGAACTTCTCTCACGGCAACAGGCCAGATTTTACCAGCGATCGCGTCTCTGAACGACTGAATATAATCCATATTCAGGTCTCCCCCAAAGCACGAACATTTAAAAGCGATAAAACAACGCGACGACGACGTTTTATTCGCCCAGAGGAGACTGTGAAACACGCGAGCAGAAGCAGGAACTGAAAGTGACAGCAGCCGccgaacttttttttttgccgtttgTTACGCTACACGGTTTACGCACGTAACGTGACGCGACGCGACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU169197 lncRNA downstream 239931 19719186 ~ 19719936 (-) True G114611
TU169194 lncRNA downstream 266474 19693138 ~ 19693393 (-) True G114608
TU169193 lncRNA downstream 275937 19683622 ~ 19683930 (-) True G114607
TU169068 lncRNA downstream 316377 19602438 ~ 19643490 (-) False G114539
TU169265 lncRNA upstream 129087 20101044 ~ 20104270 (-) True G114663
TU169371 lncRNA upstream 194838 20166795 ~ 20177758 (-) True G114715
TU169376 lncRNA upstream 202206 20174163 ~ 20244153 (-) True G114718
TU169402 lncRNA upstream 244146 20216103 ~ 20217581 (-) True G114741
TU169418 lncRNA upstream 273064 20245021 ~ 20245239 (-) True G114747
XM_043260110.1 mRNA downstream 73204 19865726 ~ 19886663 (-) True si:dkey-122a22.2
XM_043261243.1 mRNA downstream 302143 19647572 ~ 19657724 (-) False dpys
XM_043261242.1 mRNA downstream 302144 19647572 ~ 19657723 (-) True dpys
XM_043261248.1 mRNA downstream 469134 19487757 ~ 19490733 (-) False zgc:101716
XM_043261247.1 mRNA downstream 469139 19487757 ~ 19490728 (-) True zgc:101716
XM_043261812.1 mRNA upstream 39338 20011295 ~ 20020232 (-) True sqlea
XM_043261878.1 mRNA upstream 50287 20022244 ~ 20027005 (-) True rnf144b
XM_043261589.1 mRNA upstream 64391 20036348 ~ 20039187 (-) True ccdc127a
XM_043261591.1 mRNA upstream 67990 20039947 ~ 20041361 (-) True mrpl32
XM_043260790.1 mRNA upstream 104850 20076807 ~ 20127963 (-) True adam22
XR_006252818.1 other downstream 538773 19416962 ~ 19421094 (-) False cd22
TU168710 other downstream 1138779 18815216 ~ 18821088 (-) True rpz
TU168714 other downstream 1138779 18815216 ~ 18821088 (-) False rpz
TU168715 other downstream 1138779 18815216 ~ 18821088 (-) False rpz
TU168666 other downstream 1261551 18693912 ~ 18698316 (-) False LOC122360940
TU169372 other upstream 194838 20166795 ~ 20167614 (-) False G114715
TU169487 other upstream 470008 20441965 ~ 20452450 (-) False G114793
TU169489 other upstream 470008 20441965 ~ 20452450 (-) True G114793
TU169673 other upstream 680020 20651977 ~ 20653574 (-) True G114901
TU169801 other upstream 1040650 21012607 ~ 21017105 (-) True G115003

Expression Profile