RNA id: TU170633



Basic Information


Item Value
RNA id TU170633
length 431
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G115579
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 22996959 ~ 22997389 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCTGGTGGACAGAAATGGAATGCGTTCATAAATGTAACAGGAGTTGACACACAAAAccaataaatacttaaaaatagaACTTAACAGGTTTCACACCAACCCAAAGGGGGAGTCAATCTTTTTAATCCTGTTATTATTTCTAGGTAAtgatctgttttcattttcaattttagttacaattttatgaatttttttttatatatatgttatatacatttttattgtttcttattgatttattttattattgtagtttcagttttagttccaGTTATCCATAATAACCCTGGTCTTGTTAATTcatgatccttcacaaatcattctaatatgcttatttggtgctcaagaaacaatttactaaaaatatttctgtgtaaactgtttttttcatgatttgattaactgaaaaaaaattatatatatataaata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU170604 lncRNA downstream 36026 22958684 ~ 22960933 (-) True G115559
TU170586 lncRNA downstream 85636 22910879 ~ 22911323 (-) True G115548
TU170567 lncRNA downstream 95821 22892106 ~ 22901138 (-) False cdc42se1
TU170565 lncRNA downstream 108958 22885715 ~ 22888001 (-) True G115536
TU170525 lncRNA downstream 222927 22773766 ~ 22774032 (-) True G115496
TU170635 lncRNA upstream 2772 23000161 ~ 23000665 (-) True G115581
TU170636 lncRNA upstream 4626 23002015 ~ 23002827 (-) False G115582
TU170637 lncRNA upstream 4760 23002149 ~ 23003118 (-) True G115582
TU170639 lncRNA upstream 7498 23004887 ~ 23005837 (-) True G115583
TU170653 lncRNA upstream 47475 23044864 ~ 23045681 (-) True G115595
XM_043260164.1 mRNA downstream 14068 22977925 ~ 22982891 (-) True LOC122359931
XM_043260054.1 mRNA downstream 67042 22915967 ~ 22929917 (-) True LOC122359864
XM_043261867.1 mRNA downstream 95772 22892102 ~ 22901187 (-) True cdc42se1
XM_043261414.1 mRNA downstream 181864 22812569 ~ 22815095 (-) True si:dkey-23o4.6
XM_043261382.1 mRNA downstream 199939 22779235 ~ 22797020 (-) True plekho1b
XM_043261710.1 mRNA upstream 67356 23064745 ~ 23072189 (-) True LOC122360867
XM_043260337.1 mRNA upstream 83840 23081229 ~ 23089594 (-) True LOC122360042
XM_043260604.1 mRNA upstream 92568 23089957 ~ 23096651 (-) True LOC122360196
XM_043260608.1 mRNA upstream 99878 23097267 ~ 23102702 (-) True LOC122360198
XM_043260610.1 mRNA upstream 105781 23103170 ~ 23109883 (-) True LOC122360201
TU170599 other downstream 62992 22932627 ~ 22933967 (-) True G115554
TU170138 other downstream 907905 22087649 ~ 22089054 (-) False eny2
TU170105 other downstream 1028424 21964855 ~ 21968535 (-) True G115207
TU170018 other downstream 1193155 21801475 ~ 21803804 (-) True G115149
TU170010 other downstream 1292000 21704018 ~ 21704959 (-) True G115141
TU171080 other upstream 522419 23519808 ~ 23524382 (-) True G115882
XR_006252802.1 other upstream 590796 23588185 ~ 23609841 (-) False usp45
TU171098 other upstream 672509 23669898 ~ 23675298 (-) False mchr2a
TU171232 other upstream 1329318 24326707 ~ 24327973 (-) False phactr4b
TU171647 other upstream 2670430 25667819 ~ 25676410 (-) False LOC122361130

Expression Profile