RNA id: TU170654



Basic Information


Item Value
RNA id TU170654
length 272
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G115596
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23046022 ~ 23046293 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcgtatACTGGTGCAACTGCCAGATCCAATATATTCGGCACAGCATtgtcttttagtttcaattattttgaaaatcctGCAGTGCTTAGTTTTCAAACTAATCTTCCCTAATTCTGGGATCAGAAGGAATGCAAGGCAAAGACTTTTTTCACAACTTGTCACTGCACAGCATCTTTGTTGTCTTCCGAGCAATCTTTATCATTCGGTGTCTTGTCATTTACCTAGTATGTGCACAAATCTGTGGGAGGGCTgtgatgtagaagcaggtgTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU170653 lncRNA downstream 341 23044864 ~ 23045681 (-) True G115595
TU170639 lncRNA downstream 40185 23004887 ~ 23005837 (-) True G115583
TU170637 lncRNA downstream 42904 23002149 ~ 23003118 (-) True G115582
TU170636 lncRNA downstream 43195 23002015 ~ 23002827 (-) False G115582
TU170635 lncRNA downstream 45357 23000161 ~ 23000665 (-) True G115581
TU170655 lncRNA upstream 189 23046482 ~ 23048695 (-) True G115597
TU170656 lncRNA upstream 3256 23049549 ~ 23049843 (-) True G115598
TU170657 lncRNA upstream 4014 23050307 ~ 23052275 (-) True G115599
TU170664 lncRNA upstream 9802 23056095 ~ 23056530 (-) True G115601
TU170681 lncRNA upstream 25966 23072259 ~ 23073450 (-) True G115611
XM_043260164.1 mRNA downstream 63131 22977925 ~ 22982891 (-) True LOC122359931
XM_043260054.1 mRNA downstream 116105 22915967 ~ 22929917 (-) True LOC122359864
XM_043261867.1 mRNA downstream 144835 22892102 ~ 22901187 (-) True cdc42se1
XM_043261414.1 mRNA downstream 230927 22812569 ~ 22815095 (-) True si:dkey-23o4.6
XM_043261382.1 mRNA downstream 249002 22779235 ~ 22797020 (-) True plekho1b
XM_043261710.1 mRNA upstream 18452 23064745 ~ 23072189 (-) True LOC122360867
XM_043260337.1 mRNA upstream 34936 23081229 ~ 23089594 (-) True LOC122360042
XM_043260604.1 mRNA upstream 43664 23089957 ~ 23096651 (-) True LOC122360196
XM_043260608.1 mRNA upstream 50974 23097267 ~ 23102702 (-) True LOC122360198
XM_043260610.1 mRNA upstream 56877 23103170 ~ 23109883 (-) True LOC122360201
TU170599 other downstream 112055 22932627 ~ 22933967 (-) True G115554
TU170138 other downstream 956968 22087649 ~ 22089054 (-) False eny2
TU170105 other downstream 1077487 21964855 ~ 21968535 (-) True G115207
TU170018 other downstream 1242218 21801475 ~ 21803804 (-) True G115149
TU170010 other downstream 1341063 21704018 ~ 21704959 (-) True G115141
TU171080 other upstream 473515 23519808 ~ 23524382 (-) True G115882
XR_006252802.1 other upstream 541892 23588185 ~ 23609841 (-) False usp45
TU171098 other upstream 623605 23669898 ~ 23675298 (-) False mchr2a
TU171232 other upstream 1280414 24326707 ~ 24327973 (-) False phactr4b
TU171647 other upstream 2621526 25667819 ~ 25676410 (-) False LOC122361130

Expression Profile