RNA id: XR_006252761.1


Basic Information

Item Value
RNA id XR_006252761.1
length 494
lncRNA type inter_gene
GC content 0.57
exon number 3
gene id LOC122360079
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27520190 ~ 27579866 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTGGTGCCGCCGCGCTGGATGATCTCGACGTCTTCGGTACAGATGAAGCCGTTCAGCTGGAGATTGTCCAGAATGCACTGCGTGTTCTTCACCTGCTCCACCAGCAGCTCGCGGTGTGACGTCAGCAGCCTCAGGGGCTCTTTCTAAAGACTGTACCTGTAGATACTGCGGCGAAGGTGGTGCATAAACGCAGCTGTTCATGATGTACGTCCGACAGCTCAGGTCCTGTCCGCTGGTGGAGACGTTGACCTCCACTGGACTGTAGGTGCCCATTTTCACGTTCTCCTGCCTGCAGAGGAACGTCCAGCACACATGAGGAGCTTTCTGACGAGATCTCGGACTAAAACATATACTGAGTGCCGTTTGGGGTCTACCTGTCGAGGGACTCCAGGTCTGACATGTTCATCCTCCACACGACGCCCCAGACCTCGTCCCCGGGGCTGTGTTCGATGGTGGCGACCCCTCCGTGCCAGCGCTGACTCGCCAGTCCTTT

Function

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0003839 gamma-glutamylcyclotransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU172433 lncRNA downstream 80285 27378560 ~ 27489679 (-) False G116733
TU172434 lncRNA downstream 80285 27480300 ~ 27489679 (-) False G116733
TU172435 lncRNA downstream 80285 27480300 ~ 27489679 (-) True G116733
TU172424 lncRNA downstream 91321 27438512 ~ 27478643 (-) True G116727
TU172426 lncRNA downstream 91321 27476243 ~ 27478643 (-) False G116727
XR_006252760.1 lncRNA upstream 4788 27584654 ~ 27592026 (-) True LOC122360078
TU172536 lncRNA upstream 7037 27586903 ~ 27592021 (-) False LOC122360078
TU172568 lncRNA upstream 28346 27608212 ~ 27608965 (-) True G116812
TU172570 lncRNA upstream 32202 27612068 ~ 27612500 (-) True G116814
TU172603 lncRNA upstream 96122 27675988 ~ 27676859 (-) False G116833
XM_043260399.1 mRNA downstream 10992 27538393 ~ 27558972 (-) True LOC122360076
XM_043260087.1 mRNA downstream 188175 27375901 ~ 27381789 (-) False si:ch211-269k10.4
XM_043260088.1 mRNA downstream 188175 27375901 ~ 27381789 (-) True si:ch211-269k10.4
XM_043260797.1 mRNA downstream 311954 27242882 ~ 27258010 (-) False brd9
XM_043261498.1 mRNA upstream 33907 27613773 ~ 27621631 (-) True LOC122360683
XM_043260097.1 mRNA upstream 42763 27622629 ~ 27627516 (-) True LOC122359885
XM_043260268.1 mRNA upstream 48691 27628557 ~ 27630274 (-) True LOC122359999
XM_043261566.1 mRNA upstream 51900 27631766 ~ 27637531 (-) True LOC122360733
XM_043260929.1 mRNA upstream 105401 27685267 ~ 27690120 (-) True LOC122360378
TU172454 other downstream 209135 27358707 ~ 27360829 (-) True G116745
TU172373 other downstream 571605 26994167 ~ 26998359 (-) False LOC122360878
TU172354 other downstream 614130 26954220 ~ 26955834 (-) True G116677
TU172337 other downstream 693354 26874398 ~ 26876610 (-) True G116668
TU172263 other downstream 756990 26810317 ~ 26812974 (-) False G116632
TU172557 other upstream 43561 27623427 ~ 27627660 (-) False LOC122359885
TU172608 other upstream 127850 27707716 ~ 27727944 (-) False G116836
TU172609 other upstream 212838 27792704 ~ 27804770 (-) True G116836
TU172659 other upstream 383622 27963488 ~ 27964958 (-) True G116868

Expression Profile