RNA id: XM_043260068.1


Basic Information

Item Value
RNA id XM_043260068.1
length 1561
RNA type mRNA
GC content 0.48
exon number 6
gene id coq3
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23567058 ~ 23572317 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTCACGCCGAGTTTCTGCTCGGTCAGAAGTTCTGCGAACACGCCACGGTCACATTGGATTTACTGACTGTCTGTGATAATTTAAGTTACATGTGACGCAGTAAAATGCAATCATGTACTCCAAGAAATTAGTACGATTAGCTTTTGGGCTGTTGGCAGAATCTGCGTTTAGATGCCCGTCAACACGAAGCGTGTCCTCCGGAGTGAAAGCAGTGCGGTCTCTGTGCAGCTGGACGGTGTGTCAGCATCACAGACAGAAACATCAGTTGTCGAACGGATTGACCCGTCTAAATGTCCGCACGGTTTCCCAGACTACTCTCGACCCCGCCGAGGTGCGGAAGTTTCAGGCCATGGCGAGCAAGTGGTGGGATCTACAGGGAGAGTTTGCAGCCCTGCACTCCATGAATGACATAAGAGTGCCTTTCATACGGGATAATTTGTTGAATGTGCACGGCGTGCGGCAGTTGGGCAAACCTCTGGCTGGACTGAGAATCCTGGACGTTGGCTGTGGTGGAGGAGTGCTGAGCGAGCCACTAGGGAGGTTAGGAGCGGACGTGCTGGGAATCGACCCAGTGGAGGACAGTGTGCGGACCGCAGAGCTGCACTCCTCCTATGATCCTGAATTACGGGACAGAGTTCGCTATGAGGCCTGCACCCTGGAGGAGCTCGCAGAGGAGGAAGTAGAGGGATTTCATGCTGTAGTGGCATCTGAGGTGGTGGAACATCTGGCTGACCTGGACGCCTTTGCCAGCTGTTGTCAGCAGGTGTTGAAGcctGGTGGCTCTCTTTTCATCACCACTCTTAACAAAACCAACTTGTCCTACGTTTTTGGGATTGTGGCGGCAGAGCAGCTGTTAAGGATTGTACCGAGTGGCACTCACGACTGGGAGAAGTTCATCAGCCCAGAGGATTTGGAACGACTTCTGGAGTCTTTTGGTTTCTACGTGGAGGCTATCAGAGGCATGATGTACAATCCTCTCACTGGAGCTTGGAGCTGGCAGAAGAGCACTGCCATCAACTATGCCCTGCATGCAATCAAACGCAGAGAAGAACCCCAGCCTGACCGGATGTGGGCTGAGAGTGAGAATATAGATGAGCCAGGTCGAGCCACGAGTTACAGCTGAGCTACTTTAATGTGGAAATGCTATCAAAAGACTTCACCTTCTCGAGAACAGAGAACTAACCCACACTTAAGATCTCAAAATATGTTTCATAGTGAAAGAGTTGCTGAACCGGTAATAATCATTCTTTGCAATGTGTTActtgataaaacattttgtatgaGAAGCACGATTCATAGAACATCTTTTGTAAAGCTCTTGTTAAAATGAGAACGGAATCAGATTGAAGCGCTTTTGGTCTGCTTAACATGCAGCAGTCGCATGCCACATGTCATTTCAAAAGATTTGTTGGTATATTTTAACAATCATTtagttgtgtgttttgtggtgGTGATCTTTGGGTGTTTTTTGTCACAGGCCAAACAGACATAGAGAATTATATAATGATTTGGGACTTAAAAAGTATAggtactaaataaaatgaaatcactTGTGTCATA

Function

GO:

id name namespace
GO:0006744 ubiquinone biosynthetic process biological_process
GO:0032259 methylation biological_process
GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity molecular_function

KEGG:

id description
K00591 COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170758 lncRNA downstream 239165 23326208 ~ 23327893 (-) True G115669
TU170714 lncRNA downstream 377408 23185050 ~ 23189650 (-) True G115631
TU170695 lncRNA downstream 399118 23165193 ~ 23167940 (-) True G115621
TU170608 lncRNA downstream 489188 23074303 ~ 23077870 (-) True G115563
TU171122 lncRNA upstream 243580 23815897 ~ 23816157 (-) True G115910
TU171123 lncRNA upstream 244583 23816900 ~ 23817100 (-) True G115911
TU171127 lncRNA upstream 248202 23820519 ~ 23821825 (-) False G115914
TU171128 lncRNA upstream 248202 23820519 ~ 23821387 (-) False G115914
TU171126 lncRNA upstream 248535 23820852 ~ 23822288 (-) True G115914
XM_043260066.1 mRNA downstream 214 23556775 ~ 23566844 (-) True faxcb
XM_043261851.1 mRNA downstream 30236 23527088 ~ 23536822 (-) True fbxl4
XM_043261198.1 mRNA downstream 163428 23389423 ~ 23403630 (-) True mms22l
XM_043259987.1 mRNA downstream 198105 23367501 ~ 23368953 (-) True calhm6
XM_043259989.1 mRNA downstream 199685 23362337 ~ 23367373 (-) True calhm5.1
XM_043260065.1 mRNA upstream 654 23572971 ~ 23579881 (-) False pnisr
XM_043260063.1 mRNA upstream 654 23572971 ~ 23579881 (-) False pnisr
XM_043260064.1 mRNA upstream 654 23572971 ~ 23579766 (-) True pnisr
XM_043260939.1 mRNA upstream 10676 23582993 ~ 23609834 (-) True usp45
XM_043260465.1 mRNA upstream 95748 23668065 ~ 23675345 (-) True mchr2a
TU171080 other downstream 42676 23519808 ~ 23524382 (-) True G115882
TU170599 other downstream 633091 22932627 ~ 22933967 (-) True G115554
TU170138 other downstream 1478004 22087649 ~ 22089054 (-) False eny2
TU170105 other downstream 1598523 21964855 ~ 21968535 (-) True G115207
TU170018 other downstream 1763254 21801475 ~ 21803804 (-) True G115149
XR_006252802.1 other upstream 15868 23588185 ~ 23609841 (-) False usp45
TU171098 other upstream 97581 23669898 ~ 23675298 (-) False mchr2a
TU171232 other upstream 754390 24326707 ~ 24327973 (-) False phactr4b
TU171647 other upstream 2095502 25667819 ~ 25676410 (-) False LOC122361130
TU172219 other upstream 2807355 26379672 ~ 26384187 (-) True G116604

Expression Profile