RNA id: XM_043260088.1


Basic Information

Item Value
RNA id XM_043260088.1
length 1305
RNA type mRNA
GC content 0.40
exon number 6
gene id si:ch211-269k10.4
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27375901 ~ 27381789 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttttttttgaccaacCACACGAAAGTGGCTTTTTTCGGtatcgaaaaaaaaaaccccagtgAAGTGACACCCTGATCTCTTTCTCACTTTAACACGGAAGACAGGCTCGGCTCGAATATGGCCAAGGCTGATATTGAGATGGACATTCAGAGACACGAAGACTCTGCTGGAGGAAGACTTGACGATGAAGGGCCCCTGATCAAGTATTACAGGGCCAGTGAGGTTCTGCCGGGCCCCGTGCCGGCTCTGCAGAAGCTCCTCAGGAAGGGCCCGGCCACCTGcgctGCCGTGCAGTCGTCCAGCGGGATCCTGAGCTTCGGCATCGGGGTCGTGTTCGCCGCGTCGTTCGGGATCAATCTTAACCTGCTGACTGTATTCCGGGTTCCCATCCTCACTGGGATCACGTTCGTCTTCGCTGGAGTCTTGTCTAATCTTCTCTACAAACACCCCGAGCTTCtgcagACTTGTTTGGTGGCTAACATCGTCTGTCTGCTGGTGTCTGGTGTGGGATCCATCCTTCTGATCGTTGATCTTCAGCCCGGAGGAAATAACATCCAGTACAAGgcagatGGAGGTTCTGGTGCTGTGTGTGACTCTGATGGACATGATCATCGCGGCGGTGCTCATCTTCTGGTTTCACAGAGAGAAGCGTGACCACAAGCAGTGATCTTCATCTCAGCAGAAGAGTCACTCGAGACACTGAGAACAGCTACGTCACCGTCTTTTAGCATGAATGAAGAACTACAGCTTTAtttctttgtgtctttttaCTCACCAAGCTGGATATTTTCTCTGGACATATTTTCACACTGAATGAATGTATTTCTGTATGTTACTTTTGCGATGTGTTAGCAAATATTATCGCATAAAAAGCTggatattatttttgtgtacatatgttttttttactttcagagCAAAAAGATGGACTTGTATCTGGACacttgtttcaaaaaaaaaaatgcatacaataaataatgttttttttttactaataaatacaaaacataattattttcctttgtattttaatataattattgaagaaataaagaaaaataattataacacacacacacacactttatttttattgtttaatatgaaatgattgAAGCCAATGgtgacatctttttttctttattatgatttattagcAGTAAAGCTGGATATTATTTCTTTGTacatattttcacattcatATACTGAATTAATGtaattcaaaatgaattaatgttatttcgttttttctttattattatttctgtgagCAGGgaagcattttaataaattacaaaattcaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU172464 lncRNA downstream 734 27372529 ~ 27375167 (-) False G116748
TU172462 lncRNA downstream 861 27372529 ~ 27375040 (-) True G116748
TU172463 lncRNA downstream 861 27372529 ~ 27375040 (-) False G116748
TU172429 lncRNA downstream 4524 27367832 ~ 27371377 (-) True G116730
TU172418 lncRNA downstream 67680 27307776 ~ 27308221 (-) True G116723
TU172424 lncRNA upstream 56723 27438512 ~ 27478643 (-) True G116727
TU172426 lncRNA upstream 94454 27476243 ~ 27478643 (-) False G116727
TU172434 lncRNA upstream 98511 27480300 ~ 27489679 (-) False G116733
TU172435 lncRNA upstream 98511 27480300 ~ 27489679 (-) True G116733
XR_006252761.1 lncRNA upstream 188175 27569964 ~ 27579866 (-) False LOC122360079
XM_043260797.1 mRNA downstream 117891 27242882 ~ 27258010 (-) False brd9
XM_043260796.1 mRNA downstream 117891 27242882 ~ 27258010 (-) False brd9
XM_043260795.1 mRNA downstream 117891 27242882 ~ 27258010 (-) True brd9
XM_043260800.1 mRNA downstream 133162 27229786 ~ 27242739 (-) False zdhhc11
XM_043260399.1 mRNA upstream 156604 27538393 ~ 27558972 (-) True LOC122360076
XM_043261498.1 mRNA upstream 231984 27613773 ~ 27621631 (-) True LOC122360683
XM_043260097.1 mRNA upstream 240840 27622629 ~ 27627516 (-) True LOC122359885
XM_043260268.1 mRNA upstream 246768 27628557 ~ 27630274 (-) True LOC122359999
XM_043261566.1 mRNA upstream 249977 27631766 ~ 27637531 (-) True LOC122360733
TU172454 other downstream 15072 27358707 ~ 27360829 (-) True G116745
TU172373 other downstream 377542 26994167 ~ 26998359 (-) False LOC122360878
TU172354 other downstream 420067 26954220 ~ 26955834 (-) True G116677
TU172337 other downstream 499291 26874398 ~ 26876610 (-) True G116668
TU172263 other downstream 562927 26810317 ~ 26812974 (-) False G116632
TU172389 other upstream 138401 27520190 ~ 27579864 (-) True LOC122360079
TU172557 other upstream 241638 27623427 ~ 27627660 (-) False LOC122359885
TU172608 other upstream 325927 27707716 ~ 27727944 (-) False G116836
TU172609 other upstream 410915 27792704 ~ 27804770 (-) True G116836
TU172659 other upstream 581699 27963488 ~ 27964958 (-) True G116868

Expression Profile