RNA id: XM_043260110.1


Basic Information

Item Value
RNA id XM_043260110.1
length 1508
RNA type mRNA
GC content 0.48
exon number 11
gene id si:dkey-122a22.2
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19865726 ~ 19886663 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCAATGCGGAAGCGTGTCCATGCTGTGTTCGACACTCATTCAAACTAATGTAAGACTATGCGTTATCTGTCCTGTACTTGAAGTGCTTTTAAAACGGTCAGAAGATGTTGCGAAGAAGGACAAACGCACGAGAAGAGGCGGACAGTGTCAAATCTGATAGAAAAAAGACATCGGAGGACTCTGGTGTTCCCGGTGTGCCTGTCTCGCAGAGGAGCTGCTGGACTGTTGTGTCCTTCTGGATGAAGGTTTTGCTGTTCATCATCTTCACTCCACCTTTCCTGAACTATGCCTCCCTGCAGAGAGAGGGACAGGTGCTGTCAGCCACAGGTGGTCAGCTAATCGATATCGGCCTCGGCCAAAAGATCCATCTGCTGTGCAAAGGACACGGACGACCTGTTGttgttcTCGATGCTCCAGCAGGGATGTCTTCAGATGTTTGGCACTATGTGCAGGAGGGTCTCTCATTGTCAACAAAGGTGTGCACCTATGACAGAGTCGGTCTGGGATTCAGCCGAAGAACCCTGCAGAACGAATCTACAGGCACTGAGAAAGTCTGGGGAATATCAACCACTGGAAGGATGGTGGATGACCTTCATCGATTGGTCAAGGCTGCAGATATAGCCACACCCTTTATCCTGATTGGCTCTGAGTTGGGCACGCTCAACGGAAGATTCTACAGCCACATCCATGACACGCAAGTGTCTGACCTGGTGTTGATCGATCCGATCCCAGAGGATGTCTTTGAAGAGGAGAAGTGGCAGCAGTACTGgTACTCTCACCTCGTCCCGTCCCTGCAGATGATGCAGTTTTCCGCGGCTGCGGGTTTGAGTCGTCTGCTCATTATTCTGGGTGTTTTGAAGCCGGTCTTTCAGGGAGGAGACGTCTCAGAGGAGCTCATGCAGAGACAGAAATATCTTCTGTGCAACCCTGCCCATCAGAGCGCCGCCGTAGACGAGCTTTTCTTCCTCAACGAGAGCGCATCCCAAGTCAGAGAGATCTCCAGATATAAGCCTCTCTCTAGCAAGACATCTGTGCATGTGATCACTGGGGAATCCTTTGATGATCAGCTTCCTTCAGATCTCAACCAAGTGGTTGCTGAACTTCAGAGCAAGTTTTTGGAGCGCTCTTATCTCAGTGCCAATCACGTTCAGATTGTCGGGGCGGATCGTCACATGATCTACAAAAATCCATCCTCGCTTATCAAACATTTGCATAAGCTCGTGTCACAAAGGCAGTCCAACCAACAGAGGCAGTGAGATGCTTCAGAAAATGCAGCCTCTCTAATAACAACAGATCAATAACGGCTCCTTCTCTGCAGCTGTCACATACTGAGGCCAAATAACAGCTTCATATTTCTGCTTACAAAGGAAACCGAAAGACTCTGTAGTCTGTTTGTTGATGGATTGTACGTTTCGGTGAACCGCTGAAGACGTAATTTAACTGCATTTAACTGTACTTATTTTTGTCGAAATGCCTTATAAATGCGAATAAAGTTAAGGAAACAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169197 lncRNA downstream 145790 19719186 ~ 19719936 (-) True G114611
TU169194 lncRNA downstream 172333 19693138 ~ 19693393 (-) True G114608
TU169193 lncRNA downstream 181796 19683622 ~ 19683930 (-) True G114607
TU169080 lncRNA downstream 217927 19596432 ~ 19647799 (-) False dpys
TU169068 lncRNA downstream 222236 19602438 ~ 19643490 (-) False G114539
TU169218 lncRNA upstream 73204 19959867 ~ 19971957 (-) True G114626
TU169265 lncRNA upstream 214381 20101044 ~ 20104270 (-) True G114663
TU169371 lncRNA upstream 280132 20166795 ~ 20177758 (-) True G114715
TU169376 lncRNA upstream 287500 20174163 ~ 20244153 (-) True G114718
TU169402 lncRNA upstream 329440 20216103 ~ 20217581 (-) True G114741
XM_043261243.1 mRNA downstream 208002 19647572 ~ 19657724 (-) False dpys
XM_043261242.1 mRNA downstream 208003 19647572 ~ 19657723 (-) True dpys
XM_043261248.1 mRNA downstream 374993 19487757 ~ 19490733 (-) False zgc:101716
XM_043261247.1 mRNA downstream 374998 19487757 ~ 19490728 (-) True zgc:101716
XM_043260250.1 mRNA downstream 386252 19475818 ~ 19479474 (-) True upk1a
XM_043261812.1 mRNA upstream 124632 20011295 ~ 20020232 (-) True sqlea
XM_043261878.1 mRNA upstream 135581 20022244 ~ 20027005 (-) True rnf144b
XM_043261589.1 mRNA upstream 149685 20036348 ~ 20039187 (-) True ccdc127a
XM_043261591.1 mRNA upstream 153284 20039947 ~ 20041361 (-) True mrpl32
XM_043260790.1 mRNA upstream 190144 20076807 ~ 20127963 (-) True adam22
XR_006252818.1 other downstream 444632 19416962 ~ 19421094 (-) False cd22
TU168710 other downstream 1044638 18815216 ~ 18821088 (-) True rpz
TU168714 other downstream 1044638 18815216 ~ 18821088 (-) False rpz
TU168715 other downstream 1044638 18815216 ~ 18821088 (-) False rpz
TU168666 other downstream 1167410 18693912 ~ 18698316 (-) False LOC122360940
TU169372 other upstream 280132 20166795 ~ 20167614 (-) False G114715
TU169487 other upstream 555302 20441965 ~ 20452450 (-) False G114793
TU169489 other upstream 555302 20441965 ~ 20452450 (-) True G114793
TU169673 other upstream 765314 20651977 ~ 20653574 (-) True G114901
TU169801 other upstream 1125944 21012607 ~ 21017105 (-) True G115003

Expression Profile