RNA id: XM_043260119.1


Basic Information

Item Value
RNA id XM_043260119.1
length 4698
RNA type mRNA
GC content 0.48
exon number 20
gene id pik3r4
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25161763 ~ 25172461 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GATCTCGGATCAACCAATAGAGACGCACGCCTCTAGTTCACTCCTGAGACATAATAACAAACGAAGCGGTTCTTTTATGTAAATGTCTGTATTTTATATCGTTCGTGCGATTTGACATGTTTGTTAGTAACGTTCGTTTTAACCTGGGCAAAATGTAGAATGTCATTTTGAGTAAGGTGGGAAGAAATAACTATTGCTAAACAGTCGGTTAGTTGACAGCGCGCTGGGCTCAAAGAATCAGGTGTACATTTATCTTTGAGGACAGCCATGGGGAACCAGCTGGCTGGAATTGCTCCATCACAGATTCTTTCTGTAGACAGTTACTTCTCTGACATCCACGATTACGAATATGACAAAAGTCTTGGCAGTACACGGTTTTTCAAAGTGGCCCGTGCGAAACATAGAGAAGGACTGGTTGTGGTCAAGGTCTTTGCGATCCAAGACCCCTCTCTGCCCCTGACGAGCTACAAACAAGAGCTGGAGGAGCTGAAAATCAGACTACACTCCTGTCAGAACTGTCTGCCTTTTCAGAAAGCCACACTTACTGAGAAAGCAGCCATACTATTCCGGCAGTATGTTCGGGATAATTTGTACGACCGTATCAGCACACGACCATTCCTCAACAATGTGGAGAAGAAGTGGATCGCCTTCCAGCTCCTCAATGCTGTAGACCAGGCCCATAAATCTGGTGTGCGTCATGGTGACATTAAAACAGAGAACGTTATGGTGACGAGCTGGAACTGGGTGCTTCTCACAGACTTTGCTAGTTTTAAACCTACATACTTGCCTGAAGACAACCCTGCAGATTTCAACTATTTCTTTGACACGTCCAGGAGGAGAACGTGCTATATTGCACCGGAGAGATTTGTAGATGGCAGTATGTTTGCCACAGAAAGTGACCAGACAACTCCACTCGTGGACCTCTCCAGCAATAGCCAGAGGACCAAGGGAGAACTCAAACAGCCCATGGACATCTTCTCAGCTGGTTGTGTGATTGCGGAGTTGTTTACAGAGGGTGTCCCGCTCTTTGACCTCTCACAATTGCTGGCTTACCGTAAAGGACATTTCCAAACCGAACAAGTGCTGATGAAAATTGAAGATTGCAGTATTAGAGAACTGGTGGCACAAATGGTGCAGCGAGAACCGGAGAAGCGTCTGACAGCTGAAGAATATCTGAAGCAGCAGCGAGGCAAAGCTTTTCCAGAAATCTTTTATACCTTCCTTCAGCCCTACATGGCTCAGTTTGCCAAGGAGACTTTTCAGTCTGCTGACGAAAGGGTGTTAGTCATTCGTAAGAACCTGGAGAACATCCTCAATAACTTGTGCAGTGGCGGTCAAACAGGGAAGACTGAAAAACAGGAGAAGGCATCTCAGGAGATTAGTTTATCCAAGGAACAAGGGCTTGTGGTGCTGGTTTCAGTGATCACATCTTGTCTGCAGACACTACGTTTCTGCGACTCCAAGCTGGCAGCGCTGGAGCTGATTCTTCATCTGGCAGGTCGGCTGAATGTGGAGATACTTCTGGACAGGATTACACCTTACTTACTGCACTTCTGCAATGACTCTATGCCACGCGTCAGGGCTGAAGCCGTCTGCACGCTGACTAAAGTGCTGGCATTGGTAAAGGAGGTTCCTCGCAATGATGTGAATATTTACCCAGAATACATTCTACCTGGGATCGCCCACTTGGCCCAAGATGAAGCCACAATTGTCAGACTTGCTTATGCAGAGAACATAGCACACTTGGCGGAGACAGCGCTTCGCTTCCTGGAGCTGGTGCAGGAGAATAATTTGAGCTCTGAACAAGACCTCAATGGAGAGGACACAGAAGAAACTCTTCACCCCAATGAGAACTATGATTCAGAGCTGCAGGCCTTGCATGAAATGGTTCAGCAGAAGGTGGTGACTTTACTGAGCGACCCTGAGAACATTGTCAAACAGACGCTGATGGAGAACGGCATCACTCGCCTCTGCGTGTTCTTTGGGAGGCAGAAAGCCAATGATGTCCTTTTGTCTCACATGATCACCTTCCTTAATGACAAGAACGACTGGCATCTCCGTGGAGCTTTCTTTGACAGCATAGTTGGTGTAGCAGCATATGTGGGCTGGCAGAGTTCCTCCATCCTGAAGCCTCTTCTGCAGCAAGGCCTGAGTGACGCTGAGGAGTTTGTCATTTATAAAGCTCTCAATGCTCTCACTTGCATGTGTCAGCTGGGGCTACTGCAGAAACCTCACATATACGAGTTTGTCAGTGATATTGCTCCTTTCTTGTGTCACCCCAATCTGTGGATCCGCTATGGAGCTGTGGGTTTCATCACTGTTGTCGCTCAGCACCTCAACATTGCTGACGTCTACTGCAAACTCATGCCCCATCTAAACCCTTTCATCACACAGCCTATTATACAGATTGATAAGGAGATTGTGTTACTCAGTGTGCTGAAAGAGCCTGTAAGTCGCTCTATCTTTGACTATGCGCTGCGTTCCAAAGATATCGGAAGCCTCTTCAGACACCTTTTACTTCGCCAAAAAAAGCGCAACGGTTCCATCCCAGAATGCCCTGTTCCCGAGGATCCCGCAATTGCCCAGCTACTTAAGAAACTTCTTTCACAgGGGATGACAGAGGCTGAGGAGGACAAGCTCTTAGCTCTGAAAGATTTCATGCTCAAGTCCAACAAGGCCAAAGCCAACATCATCGACCAGAGCCACCTGAGTGATGGAGCCCACAGCGGAGTCATTGACCTTGGTACACTGGGCATCACTGGTCGACAAGTGGACCTCATCAAGCCCAAGCAGGAATCTGAAGACAAGAGAGCTCGCAAACATACGAAACAGGACTCCAACTTGAACGAGGAGTGGAAGAGCATGTTTGGTTCTCTGGACCCTCCCAGCTCGGCGCAGACACCTTCGACGATTCCTGAAAGTGGAGCTGTGCAGTCCAGGAAAACCACAGCGTTCCCTACTATTCAAGTGGTGCAGTCTGTAAGCGGGGCGTCCACGTACCAGCGTCGCATCACCACATGCAAGGCAGAGCTACAGCAGCTGGTGCAGCAGAAAAGAGAGCAGTGCAATGCAGAACGCATGGCCAAACAGATGATGGAGAGTGCAGAGTGGGAGAGCAAGCCTCCACTGCCAGGGTGGCATCCAAAAGGTCTTCTAGTGGCCCATCTCCACGAGCACAAATCTGCTGTGAACCGAATCAGAGTCTCCGACGAGCACTCCATCTTTGCTACATGCTCCAATGATGGCACTGTAAAGATCTGGGACAGCCAGAAAATGGAGGGCAAGACAACAACCACAAGGTCTGTGCTGACATATTCTCGGATTGGAGGCCATGTCAAAACACTGACCTTTTGTCAGGGGTCACATTACCTTGCAGTTGCATCAGATAATGGTTCAATCCAGCTTCTTGCAGTTGAGGCAAACAAGCCGCCCAAATCACCCAAAGTCCAGCCCTGTCAGACCAGGTTCCTGGATCCAAAGGATGAGGGCTGTGCGGTGGACGTACATCACTTTAACTCAGGGGCACAGACAGTTCTGGCCTACGCGACTGTGAACGGTTTTTTGGTGGGTTGGGATCTCCGCAGCAATAGCAATGCCTGGACCCTCCGCCACGACCTGCGCCTAGGCCTCATCACTTCCTTTGCTGTGGACATGCACCAGTGTTGGCTGTGTGTGGGCACAAGTAATGGCACAATGGCTTGCTGGGATATGCGTTTTCAGTTGCCAATTTCCAGCCACTCCCACCCAGCCCGAGCGAGAATCAGACGCCTGCTGATGCATCCACTCTACCAATCCTCTGTCATTGCAgCTGTCCAAGGTAACAACGAGGTGTCCATGTGGGATATGGAGACTGGAGACAGGAAGTTCACCCTGTGGGCTAGCTCTGCACCTCCGCTTTCAGAAATGCAGCCCTCTCCTCACAGTGTTCATGGGATATACTGCAGCCCTGCTGATGGCAACCCTCTCCTACTTACAGCTGGATCTGACATGAGAATCAGGTTTTGGGATTTGGCCTACCCTGAGAGGTCCTACATCGTTGCAGGAGGTGCAAACGACTCGCTTCACTGCCCCTCTGTGTTCTATAACCGCAAGATCATAGAAGGAACAGAAGTAGTACAGGAAATCCACAGTAAACAGAAGAGCGGATCCACTGAGGACACACCCCGCCGTGGCCCAGAATCCCTTCCTGTGGGTCACCACGACATCATTACTGATATTGCGACTTTCCAGACCACCCAGGGCTTTATAGTCACCTCTTCTAGAGATGGCATTGTCAAAGTCTGGAAGTAAGAGAGAGCCTCTGCCAAGATGGGACACCGTTAAATGGACAACCAATCAAGTGcactataaatttaaatataatgccaattaatataattaagtaatttaGGATCAaatccacttaaaaaaaaattaaatgtaactatATAAAACTGCAAAAGCCAACAGTTTGTGTGTGAACAGTTTGCtttgtatgttttagtttttttgtgcttcatgTGAATATGATAACACTGCAGAAAACAGGACATGGCAATCTAAAACAGTGTTTCACACAGTAATTACACTTATAGTGTTATTTCTGCACAGCTAAACCCATGTAGATTTGAAGCTTGAGAGCAAGACATGGATTGAAAGTTCCATTATAATCACTGTGTAATAGTTATGGatattgctgaataaatgtcatGACATTTA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171572 lncRNA downstream 79167 25079267 ~ 25082596 (-) True G116212
TU171502 lncRNA downstream 326399 24835099 ~ 24835364 (-) True G116164
TU171520 lncRNA downstream 327805 24833536 ~ 24833958 (-) True G116179
TU171515 lncRNA downstream 338353 24821501 ~ 24823410 (-) True G116174
TU171247 lncRNA downstream 688398 24441327 ~ 24473365 (-) False serinc2l
TU171618 lncRNA upstream 4991 25177452 ~ 25178607 (-) True G116242
TU171609 lncRNA upstream 38932 25211393 ~ 25558018 (-) True G116237
TU171610 lncRNA upstream 38932 25211393 ~ 25557473 (-) False G116237
XR_006252863.1 lncRNA upstream 492258 25664719 ~ 25702534 (-) False LOC122361130
XR_006252864.1 lncRNA upstream 494621 25667082 ~ 25702534 (-) True LOC122361130
XM_043261776.1 mRNA downstream 43310 25107398 ~ 25118453 (-) True capn7
XM_043261050.1 mRNA downstream 72057 25082913 ~ 25089706 (-) True mrps15
XM_043261051.1 mRNA downstream 78986 25080457 ~ 25082777 (-) True LOC122360438
XM_043261047.1 mRNA downstream 81458 25072879 ~ 25080305 (-) False oscp1b
XM_043261049.1 mRNA downstream 81458 25072879 ~ 25080305 (-) True oscp1b
XM_043260388.1 mRNA upstream 7369 25179830 ~ 25190749 (-) True calb1
XM_043260387.1 mRNA upstream 7706 25180167 ~ 25190749 (-) False calb1
XM_043260025.1 mRNA upstream 21940 25194401 ~ 25200900 (-) True pnp4b
XM_043261711.1 mRNA upstream 28490 25200951 ~ 25206208 (-) True LOC122360868
XM_043261712.1 mRNA upstream 53696 25226157 ~ 25232002 (-) True LOC122360869
TU171232 other downstream 833790 24326707 ~ 24327973 (-) False phactr4b
TU171098 other downstream 1486465 23669898 ~ 23675298 (-) False mchr2a
XR_006252802.1 other downstream 1551922 23588185 ~ 23609841 (-) False usp45
TU171080 other downstream 1637381 23519808 ~ 23524382 (-) True G115882
TU170599 other downstream 2227796 22932627 ~ 22933967 (-) True G115554
TU171647 other upstream 495358 25667819 ~ 25676410 (-) False LOC122361130
TU172219 other upstream 1207211 26379672 ~ 26384187 (-) True G116604
TU172308 other upstream 1634659 26807120 ~ 26809146 (-) True G116654
TU172257 other upstream 1637856 26810317 ~ 26812909 (-) False G116632
TU172261 other upstream 1637856 26810317 ~ 26812909 (-) False G116632

Expression Profile