RNA id: XM_043260132.1


Basic Information

Item Value
RNA id XM_043260132.1
length 2342
RNA type mRNA
GC content 0.50
exon number 12
gene id cep76
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9103514 ~ 9110755 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGCCAGGATTTAAAACGTCAGTTGCAGGAGGCGTTGACATCGCTtgcaggaaaaagaaaataaataaataatataagtaaCTTATATTGAAAACCTGTGTTTAATGCAGCCCCCGACTTCgactgttttgatttttaaatttgtggcattttcaCGCTTGAAAACATGTCCCTGCCACCAGAGAAAGCAAcggaattaaaacaaataatccaTGACCATTTAATCAAGATGGATATCCATGGTAAAATCCGTGATGTTTTAGCGGAGACCGTGAGGGGCGACGGGCAGCACGGACAGCGCTCTCTCTCTGAGGAGGATTTCATACACGCTCTCCAGCGGAGGGGAGTCGTGGATGATGTGATGAAAGACCTCCACTTCACAAATGTGGATGTTTCTCAGGCTGAAGCTGATTCTGTGAACAAGTCTGCAGCTCGTTTTGTAGACAAGAACTTCGCACAGCTGAAGACAACTAACATTAGCCCACTAAGGAGATACCTCTACCTACAAGTTCTGGGTGGTAAGGCCTTCCTGGAACACTTGCAGGAGCCAGAACCTTTACCCGGTCAGGTGTGCTCCACGTTCACCCTTCATCTCCACTTCCGCAACCAGCGCTTCCGCTCCAAACCAGTCCCGTGTGCCTGTGAACCAGACCTACAGGAGGGCTTTCTTCTGGAAGTCCACAGAGATGGCCCAGGAGATGCTAGCAAGATGGCTGATGCTACCACCATGCTGTCCATCTGTGATCCGGTGCATTTGGTGCTGATTAAAACGGACACGTCTGGGGACACAACActcatttcttcttattttctTGACTGGAGGAGAGTTCTCGGTGCTCCCAACGGGAAAACCAGCATCTCAGCAGAACTGCTGGGAGTGGgcagtGAATGTAAAGTAGCTGTTGGTGTTCTGAATCTGAAACTGGAAATGTATCCTCCTCTTACGGAGACCTTGAGCCCCGATGTCGTCTCCACCCAGCAATCCCTGGAAAGGCAGAAAACGGCAGAGAAGGAGAGGCTGTTTTTGGTATATGCCAAACAGTGGTGGCAGGAGTTCTTGGAAATTCGACCCTCACACCAGTCCAAGCTGGTGAAGATCTTTGCTCAGGATGAAAATGGTGTGAACCGGCCTGTGTGTTCGTATGTACGTGTATTGCGTGCCGGCAGGTTGCTAGAGAGTCCGCGACAGGCGGCGCGTTTTGTTAGTCTGTTAGCTCAGGAGAGAGCACCTGTGGTAGGTGGAGGGGTCCGGCAGGAGCAGTGGTGCTCTATGATGGCCTTTCTCTGTAGAAACAAGGGTGACTGTGAGGATCACGCTACGCTGCTGTGTAGTCTGCTGTTGGGATTTGGACTGGATGCTTATGTATGTGTGGGCACTAAAGCTAAAAACATTCCACACACCTGGGTCATGACCTGCGGTACAGACGGCTCCATCACCTTTTGGGAAAGCTTCACTGCACACAGATACCTCCACCGTCCAATAGACCCAGATGCTCCCCCCATGGTACCGCAACCGAAACCCACCCACCCTTACCGGACGCTCGGCTGCGTCTTCAACCACAAGACGTTCCTGGCGAACTGTCAGCCGTCGGATGCCGtggagctgtgtgtgtttgacttcaCAGATGGCTCCCGCTGGAAGGTCATGAGCGAGGAGGCCGTGAGATCTGTATGTGCACCCGGCTCCACCTCCTCTCTCCCCCCGACTCCTCCTCTCTGCTCCCCTTCTGTGCTGCCTAATGAGGCCAGCAACCAACTGGAGCTGGAAATGCGCTACCTACTAGCAGAGCATAGAAAGGATCTTGGTCTAGCAACGGTGTGGGACGATCACCTGTCGTACCTGCTGTCAGCAGCGCTGTCGGCGTATGAACTAGAGCGCTGTACAGGGGTGTCGTGTGGAAACGAGGAGTTTCAGGATGCCGTGAGGAGAGCTGTACCTGACGGACACACTTTCAAAGGCTTTCCTATTCATTTCCTGCACCGTAATGCACGCAGGGCGTTCGCTACCTGCCTCAGGTCACCTTTCTGTGAAGAGATTGTTTGCTGCAGAGGGGATCATGTGCGCCTGGCAGTGAGGGTTCGTGTGTTTGCCTATCCAGAGTCGGCTTGTGCCGTTTGGATCATGTTTGCTTGCAAGTACAGATCTGTGCTGTGACAGAAAGAAGTACTTAAACTATCTGCTGGTTTTGGAGTATTATTATGAGTTTTACAACGACACGTATACCATTTAAATCTATGCAGTACTATTCCAGTTGTTTTCCATGTACAGTATCTGTGTCAGTTGGAGACTATTAAAATGGTATTTATggatatatttttctaaataaatcgTTTTTACTATA

Function

GO:

id name namespace
GO:0046599 regulation of centriole replication biological_process
GO:0005814 centriole cellular_component

KEGG:

id description
K16457 CEP76; centrosomal protein CEP76

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163744 lncRNA downstream 72065 9031135 ~ 9031449 (-) True G110852
TU163741 lncRNA downstream 95982 9007297 ~ 9007532 (-) True G110849
TU163733 lncRNA downstream 98308 9004538 ~ 9005206 (-) True G110842
TU163727 lncRNA downstream 102086 9000787 ~ 9001428 (-) True G110836
TU163682 lncRNA downstream 257521 8845525 ~ 8845993 (-) True G110807
TU163808 lncRNA upstream 15930 9126685 ~ 9191339 (-) False G110897
TU163809 lncRNA upstream 15930 9126685 ~ 9191339 (-) False G110897
TU163810 lncRNA upstream 77125 9187880 ~ 9191339 (-) True G110897
TU163945 lncRNA upstream 275424 9386179 ~ 9387391 (-) True G111005
TU163966 lncRNA upstream 489177 9599932 ~ 9607073 (-) True G111021
XM_043260162.1 mRNA downstream 73808 9026980 ~ 9029706 (-) True id4
XM_043260904.1 mRNA downstream 106528 8961054 ~ 8996986 (-) False ncalda
XM_043260907.1 mRNA downstream 106528 8961054 ~ 8996986 (-) False ncalda
XM_043260905.1 mRNA downstream 106528 8961054 ~ 8996986 (-) True ncalda
XM_043260906.1 mRNA downstream 125438 8961054 ~ 8978076 (-) False ncalda
XM_043260311.1 mRNA upstream 1507 9112262 ~ 9118118 (-) True ptpn2a
XM_043260313.1 mRNA upstream 1507 9112262 ~ 9116319 (-) False ptpn2a
XM_043260316.1 mRNA upstream 35145 9145900 ~ 9148999 (-) True LOC122360027
XM_043261663.1 mRNA upstream 38360 9149115 ~ 9157421 (-) True LOC122360802
XM_043260449.1 mRNA upstream 208800 9319555 ~ 9322529 (-) True cmtm8b
XR_006252934.1 other downstream 455959 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 467292 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 786829 8312265 ~ 8316685 (-) True G110556
TU163340 other downstream 801269 8298789 ~ 8302245 (-) True G110554
TU163327 other downstream 886919 8216029 ~ 8216595 (-) True G110544
TU163829 other upstream 35175 9145930 ~ 9152183 (-) True G110911
TU163906 other upstream 160216 9270971 ~ 9272605 (-) True G110974
TU164366 other upstream 1636038 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 1751196 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 1751196 10861951 ~ 10866428 (-) False LOC122360812

Expression Profile