RNA id: XM_043260193.1


Basic Information

Item Value
RNA id XM_043260193.1
length 2553
RNA type mRNA
GC content 0.37
exon number 3
gene id adipoqb
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8195101 ~ 8200339 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGCAGTTGCATCATTCAGAGGTTGTTCTTACTGTTCTgtgcttctgggagacaaacaCTTACAGACCAGTATGATGCTACTATGGAAGATCTTATTTGGAATATTTCTCACTGGACAACTCTGTCAAAGTCAAGACATTCTTGAGGAGAATATAGAGCAGACAGCATTAGATGAAAGGACTGAGGGGGAAGAGGACACTGAAGAGCTTGATGGTCCGGGAACAGATGTCATTCAACCTGATCATAGACAACCATGTGCCATGTGGATGGGAGGTGTTCCTGGCACACCTGGGCACAGTGGTAAACCTGGAAGAGATGGCAGAGATGGCCATGATGGACCGAGGGGTGAGAAGGGAGATAAAGGTGAAGCAGGTGAAAAGGGGGATCCTGGACAGAAGGGAGACACTGGCCCTGCTGGACCAAGAGGCTTTCCTGGCAACCCAGGTCTGAAAGGGGCCCATGGTGAAAGTGCTTTGTCTTACCATTCAGCCTTTAGTGTAGGTCTGAGTGAGCTTGTTCCTGCCACCAATGTGCCAATCCGCTTCAGCAAGTTCTTCTACAATGACCAGCACCATTACGATGACGTTTCCGGAAAGTTCCGCTGTGTTCTGCCAGGAGTGTACTTTTTTACTTATCATCTCACCGTATATACTAAAGATGCTAAAGTCAGTCTCTACATGAATGACAAGACCATCATGTTCACCTTCGACCAATACCAAGAGACCAATGTGGATCAGGCATCAGGTTCTGTTATCTTGCATTTGGAGACAGGAGATGAGGTTTGGCTGCAAGTCTATGGAGATGAAACATTTGGGGGAGTGTATGCAGATAACACCAACGACTCTACTTTCTCCGGTTTCCTCTTGTACCCTGATATTCCTGAATCTGCATCGAGACGCTGATGATACCTTAAAttagtttagttattttagcattGAGAGATGTGATTCAGTTTTTGCACCAATCTATAGTTATGAGGTTCATCAAAGTTTTGCATGTAATTAAAATacgaataatatatattattctccAGCCATAACGAATCTGCTTTTGTTCTTGAATGCCTGTTAACAAGTATTGTATGTCTGCTTCCCTATAATAACAAAAGTGctaaatgattcaaaatgagTTGCCAAGTTTAGAGATATCCCCTctataaaatcaatcaaaatgttACCAGACCAGTGGAagatattagatttttttatttctctcttgtAATTTACCACTAAACATGCAGCTGCATCTTGGACAGTGGGTTCAATTAATATattcacatttcttttcatattttttttttaacttactgtatcatatttaatacaagAATTTATAAGACCCCTATATTGTCAGCATGATTATTTAGCCTCATTACCTAAAACAATAGCAtgttcattgttcatttctttaaaaaaaaatcttaattttatttgaaaaagttaatcatttaattttattgaatattgtttaaatgcatGGCATCATGGAGTCTATGAAATaccaacatataaaaaaaatataagtgACTGATTCTGTTAAATCTTATAATGGGCCATGTTTAGGTCTTCCAACTGTACTTCCCTTGTCCTCatttaagtcactttggataaaagtgtctgctaaattagTAGATGTATATTggtgcaaaaatattttgcagttaAATAGTGCACATCTGTTAAATGAAAACTATGCAGTGAACaggattacatttaaaaaattcgAGAATATTGAGATTATTGAGATAGCTTGAGAATATCAACAAGTATCTCTAGATATTCTAGTGGGACCTGATTGTTCATTACTGTGTCTCATATCACACCACAGACTCTTTTTCTCATGTTACAACCCAGCTGGCGCCATGGGTCTCCCTTATTGAACTCCCTTATTGCCATGGACATGAAagtctaatattaatattaaccgACTGTGTATGTTACAGCATTTGTTTAATCTTGCCAGGATTTATTTTACCAATAATAACCCACAGATAGTGCACTATTATTTTACTTAAGATTTCACATCAAATGCATATGCAGAGTTCAGTCAAATCTGTATTGGTCTGCAAGCAATGAATGGATTGTCAAGAGTCTTCCATTGGCCACTGTCCAGCCCCAGCAGCTGTtgcattttctaattttatgaatttatttttagtctaaTTGGTGAGGACACCGAGGTGTAACAAGATCTCTTTCTAAAACCTGGCCCTCATTAATTTAGGAATGCCTAAAGAGACAATTCACCCATGAATTAACATTTGTCTTTTACttagtttcagattttttttttctctttattatgTGTCTagtatagaaagaaagaaagaattggTACACACAAGGTTCTTCAAAAATGAACTGAAGTACGACTATAGTTTGTAGAACAAGAGgttaattaaatgacaaaacttctatttttgagttttgagttgtttCTTTAACTGACATGTTGTTTGATCATACTACTCATATATTTGATTACACTATGTTGtgcatattattatagttaCTGAAAAACTGTGCAAATAAACGATTTAACATTAAAGTGATAA

Function

GO:

id name namespace
GO:0005581 collagen trimer cellular_component

KEGG:

id description
K07296 ADIPOQ, ACDC; adiponectin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163299 lncRNA downstream 111276 8083369 ~ 8083825 (-) False mkxb
TU163295 lncRNA downstream 111801 8082900 ~ 8083300 (-) False mkxb
XR_006252839.1 lncRNA downstream 202234 7988950 ~ 7992867 (-) True LOC122360778
XR_006252846.1 lncRNA downstream 234726 7958881 ~ 7960375 (-) True LOC122360975
TU163329 lncRNA upstream 34569 8234908 ~ 8235793 (-) True G110546
TU163331 lncRNA upstream 37419 8237758 ~ 8239176 (-) True G110548
TU163610 lncRNA upstream 347443 8547782 ~ 8551552 (-) True G110753
TU163615 lncRNA upstream 347443 8547782 ~ 8551552 (-) False G110753
TU163638 lncRNA upstream 389559 8589898 ~ 8590634 (-) True G110773
XM_043260404.1 mRNA downstream 51147 8105226 ~ 8143954 (-) True mpp7b
XM_043260483.1 mRNA downstream 102646 8082906 ~ 8092455 (-) False mkxb
XM_043260482.1 mRNA downstream 102646 8082906 ~ 8092455 (-) True mkxb
XM_043260585.1 mRNA downstream 120797 8067575 ~ 8074304 (-) True LOC122360189
XM_043260586.1 mRNA downstream 122221 8069000 ~ 8072880 (-) False LOC122360189
XM_043261660.1 mRNA upstream 38992 8239331 ~ 8256537 (-) True LOC122360799
XM_043261753.1 mRNA upstream 95687 8296026 ~ 8298481 (-) True LOC122360914
XM_043261729.1 mRNA upstream 141261 8341600 ~ 8363640 (-) True LOC122360896
XM_043261737.1 mRNA upstream 234307 8434646 ~ 8451791 (-) False pals2a
XM_043261735.1 mRNA upstream 234307 8434646 ~ 8451791 (-) True pals2a
TU163302 other downstream 102748 8090651 ~ 8092353 (-) False mkxb
TU163187 other downstream 364384 7828820 ~ 7830717 (-) False LOC122360680
TU163145 other downstream 576516 7610629 ~ 7618585 (-) False cdkal1
TU163147 other downstream 576516 7610834 ~ 7618585 (-) False cdkal1
TU163032 other downstream 993720 7195490 ~ 7201381 (-) True LOC122360222
TU163327 other upstream 15690 8216029 ~ 8216595 (-) True G110544
TU163340 other upstream 98450 8298789 ~ 8302245 (-) True G110554
TU163343 other upstream 111926 8312265 ~ 8316685 (-) True G110556
TU163623 other upstream 433011 8633350 ~ 8636222 (-) True wu:fj39g12
XR_006252934.1 other upstream 447075 8647414 ~ 8647555 (-) True LOC122361375

Expression Profile