RNA id: XM_043260197.1


Basic Information

Item Value
RNA id XM_043260197.1
length 6625
RNA type mRNA
GC content 0.48
exon number 30
gene id atp8b2
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14651573 ~ 14677758 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtatgtgtgtgtgtgtgtgggtagcCTTGGGTGTGATGCTGTTCAAAGCTTGGCTCTTGTGTGTTTTCACCGTGGTGCAGTGCAACATGAAAAGTTAAAGATGTAGGCTACACGTGAGCACGCTGGAGCATTGTGTTTAACAGTCGGGAGGATTCCTTCCTTGGCACGagactccctctctctccacacacacatcagacGTAGCACGTGCAGAAACACCTGACTCATCCAGATGTCTTCCGCAGTGCCACCCTTTCTCACCCCCTACTTGccctaaaatataaaataatctgtttatCTGCCATTTTGCCTCTGAATCTTATTACTGTATGGTTATTTCGTTGCCAGATGAGGCTGTAGTTGCTGGCTTCTTGGGTTCTAACTCATACATGTTTTACATCTCTGCAGTCTAAGTTACCCTGGCAACCTCCTCAGCCAGTTTCTATTGGCCACATCCTTGACCAATAGGACAGCTTTCTGATTATGTCATATAAAAACAACGCCGTAGTTCTAGTGGCGCTGCTATGACAGAGTCCGGTGACAGTGCTGATACAAGTAGCCGTCAGCCCGGCCATAAATCGATATTTTAGTTCAATGTCGGTTAACGTTTGCTTATTTATAAGTTTGAAGCCTTGTGCGttatactttaatatatataaaagaaaataattttgcatCACTTTCCGGAACGCAGCGAGCTTAGTTGAGATGGATGCGCAGAGACGGTGGTGTTgtgtagtgtaaaaaaaaacattcgaGAACTAGATCGAATCACACCGAATGACCTCAACGACTCTGCGGCAAATCAAAACTGAGAAGGGAGTGAAGTGTAATTTACCGCCGCGTCTGTAATCTGATGTCTTCCGCGCACCGCTCCGTCATTCGGCGCCGGTCCGCTGCTGCCGCGCGCGCCTTCCTCCGTCGCTCCGCGGCTGTGATGAGCGCAGAGCTGTGTCAGTGAAACGACGTTGGGACAACATGACTATCCCGAAAGACATCCCAGAGAAGTGGTTTCCAATCATTCTCCCtctaaaaaggaagaaagaggGATTAAGCAACGcgagaaaaataagaaaaggagCAGAGGAGGAAAGGAGAGTCCGAGCCAACGATAGAGAGTACAATGAGAAGTTCCAGTATGCTAGCAACTGCATCATGACCTCAAAGTACAACATCATTACCTTCCTACCAGTCAACCTGTTTGAGCAGTTTCAGGAAGTGGCCAATACCTACTTCCTGTTTCTCCTCATACTGCAGTTGATTCCACAGATCTCCTCTTTATCCTGGTTCACCACCATTGTGCCTTTAGTGCTGGTGCTGAGCATCACTGCAGTTAAAGATGCCACCGATGACTATTTTCGTCACAAGAGTGACAACCAGGTGAATAACCGTCAGTCTCAGGTCCTCATCGGTGGCATTCTTCAAAAGGAGAAATGGATGAATGTCAGAGTGGGTGACATCATtaaactggagaacaatcagTTTGTGGCAGCTGACCTGCTCCTGTTGTCCAGCAGTGAACCACATGGCCTCTGTTACATTGAAACGGCAGAACTGGATGGTGAGACGAACATGAAGGTGCGCCAGTCTCTGTCTGTTACCTCAGAGCTGGGGGATCCTAATAACCTGGCCCAGTTTGATGGAGAAGTGGTGTGTGAGCCACCCAACAACAAGCTCGACCGTTTCTGCGGGACTCTGTACTGGAAAGACTGCAAGTACCCCCTCAGCAACCAGAACATGCTGCTTCGCGGCTGCGTACTGCGCAACACAGAGAGCTGCTATGGCCTTGTTATTTTTGCAGGTCCTGACACCAAACTGATGCAGAACAGCGGACGGACTAAGTTCAAGCGGACCAGTATAGACAGACTGATGAATACACTGGTGCTGTGGATTTTTGGATTCCTGGTGTGTATGGGAGTGATCTTGGCCATAGGAAATGCAGTTTGGGAAAAAGAAGTGGGTGCTCTGTTCCAGAGCTTTCTTCCTTGGGACCCTCCAGTAGACAACTTCCTGTTCTCTGCCTTCCTGTCTTTCTGGTCCTATGTTATCATCCTCAACACAGTCGTGCCCATCTCCCTCTACGTCAGCGTGGAGGTGATTCGTCTGGGTCACAGTTATTTCATTAACTGGGACCGGCGGATGTTCTGCAGCCGTAGTAACACAGCAGCAGAGGCCCGGACCACCACACTGAATGAAGAGCTGGGGCAGGTGGAGTACATCTTCAGCGACAAGACGGGAACCCTCACCCAGAACATCATGACCTTCAACAAGTGCTCCATCAATGGTCACGCGTATGGTGAGGTGATGAATATTCTGGGAGCTCAGCAGAAGAGGGTCCAGCCCCTGGACTTCATTGCGTGGAACCCTTTAGCGGACCGGGACTTCTGCTTCTACGACCAGTCTCTGCTAGAGGCGGTGATGGTGGGAGAACCAGCAGTGCATGAATTCTTCCGGGTCTTGTCTCTCTGCCACACGGTCATGAGCGAGGAGAAGAGCGAGGGAGCGCTGCTGTATAAGGCCCAGTCTCCAGATGAGGGGGCGTTAGTAACAGCTGCACGCAACTTTGGCTTTGTGTTTCGCTCTCGCACACCTGGCACAGTCACCACACAAGAGCTCGGAAAGGCTGTCACATACACGCTCCTCGCCATCCTGGACTTCAATAACATCCGCAAAAGAATGTCTGTCATAGtgagGAATCCAGAGGGTCGTATTCGTCTGTACTGTAAGGGCGCAGATACAGTGCTTTTCGAGAGGCTTCACTCTTGCAACCATGATCTAATGAATATCACTTCAGACCATCTCAACgAGTATGCAGGTGACGGGTTACGGACGCTAGCGGTGGCCTATCGGGATCTGTCTGAGGAGCAGTGGGAGGAGTGGGCAGAGCGCTTCCGAGGCGCTGATAAAGCCACCGACTGCAGAGACGACCGACTGGCTGCAGCCTATGAGGAGATCGAACAGGACATgatgTTGTTGGGGGCCACGGCTATAGAAGATAAACTGCAAGAAGGGGTTCCTGAGACTATTGCTATTCTCTCACTGGCTAACATCAAGATCTGGGTGCTCACTGGAGACAAACAGGAGACTGCAGTGAATATTGGTTATTCGTGTAAAATGCTAACAGATGACATGACTGAGATCTTCATCGTTAATGGACACACTGTCCAAAGCGTACGTGAAGAACTGAGGAAAGCGAGAGAGCGAATGCTGGAGTCCACACGCACCAGAGATGGAGGGAAGGAAGCTGAAGCTCAGGGATGGGGTGGTGCTTGTGCCTTTGGAAATGGATGTGGAGGTGGCGGTGCTGCTAACTGGATGCCTGATGAGGGCAAATGTCCCCCTCCTCAGGCTCCGCCCCCTTCTTTACTGGAGTCGATCAGTGGAGAGTTCGCCCTCATCATCAGCGGACACAGCTTGGCTCATGCCTTGGAAGCGGATATGGAGCGTGAGTTTTTGGAGACGGCGTGTGCCTGTCGAGCAGTGATCTGCTGTAGGGTGACTCCTCTTCAGAAAGCTCTAGTGGTGGAACTGGTTAAACAGCATAAGAAAGCTGTCACACTCGCCATCGGAGACGGAGCCAATGACGTCAGCATGATCAAAAcgGCTCACATCGGAGTGGGCATCAGCGGTCAGGAGGGGATCCAGGCTGTGCTGGCATCAGATTACTCTTTTTCCCAGTTTCGCTTCCTGCAGCGTCTTTTGCTGGTGCACGGACGCTGGTCCTATCTGCGCATGTGCCGCTTTCTCTGTTACTTCTTCTACAAGAACTTCGCCTTCACTATGGTGCACTTCTGGTTCGGGTTCTTCTGTGGATTCTCAGCGCAGacTGTCTATGACCAGTACTTCATCACTCTTTACAATATGTACACATCCCTGCCGGTGTTGGCCATGGGCATCTTCGATCAGGACGTTCCTGAACAGAGGAGTCTGGAGTATCCGAAGCTGTATGAGCCGGGTCAGCTGAACCTGCTGTTTAACAAGCGGGAGTTCTTCATCTGCATCGCGCAGGGAATCTACACGTCTGTGGTTCTCTTCTTCATTCCCTACGGCGTTCTCTCACACGCCACGCAGAGCAATGGAGTCCCGCTGGCAGACTATCAAACTTTTGCAGTAACTACAGCGACAGCTCTTGTCATCGTTGTAAGCGTCCAGATTGCTCTGGACACCGGTTATTGGACGGCTATAAATCACTTCTTTATATGGGGCTCTTTGGGTACCTACTTCACCATCCTCTTCGCTATGCACTCcagcattttgtttaatatcttCCCCAAGCAGTTCCATTTCCTTGGAAGTGCTCATAACACACTTGGGCAGCCAGTGGTGTGGTTAACTATTGCTCTGGCCACCGTCATCTGCATTGCTCCAGTCCTTGCTTTCCGCTTTCTTAAACTGGACCTTAAACCTCAGCTCTCAGATACTGTGCGCTACACTCAACTTGTGCTGCAGAAAAAGCGAAAGCCTGGCGGACGTGCTGGTCGTGGAGTGGGCGGTGCGGGTGTAGCAAGTGGCAGTACTCTTGGCCGCTTGGGACGAGGTGGGTCTCGACGCTCTGGTTATGCGTTTGCCCATCAAGAAGGCTTCGGCGAGCTGATCACATCGGGGAAAAATATGCGCCTGAGCTCCCTGGCTCTCGCCACGTTCGCTTCTCGCCACAGCAGCAGTTGGATCGATACCCTTCGCaggaaaaaacatgcaaacaacGCTGCTGCGCAAAACACCCCGCCCACTGGAGAAGACACCTCTCAGGCTCCTCCCCTTTCCACATCTTCCTCAGCAGCAGGCGAGGCAGAGCAACCGTGTAACGAACCTGTCCCCTCTCACAGCCCCGATGATATCGCTCTCAGTGTTATTAAGTGTCCGGAAAGAGAGATCGGAGAAAATAGTACAGGAACTGCACAGGAAGCACCGTTTGTGTGGAAGGGAGCTCGTATCAGTGGTTCCAGCAGTCCCGGCCCACCTCCCATTGCAGAAGAAACGTCCAGTGGCGAGTGATGGATCGACGGACCTACTGGAATCCTTCATGTGAACGCTCACACCTTCTGACGCGTGCCCATGTTTCTGTCTGAGGACATGTGCGGTGAAGACAGCGCCCCAgacagtttagcagcaaacataTGCTTGAATTAAAACACATGGAAATGGATGCAGATTCAGACTGCGCATACAGACCGTACATTTCCCGTATTATGCTCATTCTCAGATTTCCTGTCAAGTGAGAAGGATAAATCTGTTGTTATTTGAGCTGCTTATGACTGAGTTTTCCATTCTAGCCAAGTTATCAGACTACAAACCACTAACAAACATTGCCAAGGCTGATATCGCAACACACCTGACTATACGAATAGCTGATGTAAtatgcaaaattacattttacgttAAATTAGATGAGTTCATATTTAATttggagacaaaaaaaatcctaaatttATACATTAAAGTATTTCTGTCTcatattttactataaatatatcagTGCATATCACAATATATGAATACACCGCAGATGTAACAGTTTCAAGTAACAGTTGTACAGATGTTACAGATAACTAAATGATCTGAAGTATCAGCCTCAGCTGTATcaggtttaatgtttttgtattcaaaTTGGGTAGTTCTGGATCTTATCTTGTTCGTTTAACATCTCAGTCAGGTCAAGGattgtctgtctctctatatATAGAGCGGTTCatcttttcttcagtttttttggaTTTCTTAATGACTTCCTTGTGGTCTCGTACTGTTTTGCCCATTTTGTCAGCATATTGTTTTGCTGAGTCAAACACTTCAGCTTTTTGCCTGTTTGTTGCTCAGAGGTTAGTAATGCTACTTCAATTCAAGCAAGTGAACTTTCTTACAGTATGTCCTGTTAGAGAAGGCTAGAGATTTTCTGTTTTCCCCACTGCTGAAAATAGCACTAAGATGTATGTGATAAAACACTATAGTTCTCAGTGAGAACGTGATTCTGCTGGATGAACCCGTCCTTTCTCATCCATTTCTTTGCACCATATTGGTGCTCCAGCTCTGAAGAGTCCAGTTCAACCTCAAGCTCTGCTCTACTGGACCCTCGAGGGTTTAACAATTTGCATTGATCCAGTGGACATtaattaatgtgtattttttttgaagTTGGATTCAAATAATTAACATCAGAGTTTTCAAAATGGATTCCACCTTGACCGTCATGGTCTAAATGTGGCCTTCACCGGTGTTTGGATTTAGGTAAATGGGCTAATAAGAATGTAAACATAGTGATGTGTGTTGTTTCGAATGGTTGAGACAGACCAAGAAAGTTGATAAAGATGTGTGAGAAGTTACTGTGCACCATACTTGTCCTGTTTCCTGTGTAAGTTAGGCCTAGCTCTCATACCATTAAATAGGTAACAATTATATGCCTTAAAAGCTAACgttgtgtgttatttttttaacgtGTATCTATTTCCATCCACACAcgaaacatttacatatattgcAGTAGGAGGTTAAAGGTCATAGTTTCAGTGTCTGTTAGCCAAATCCACACGATCTGTGAACAGTATGACCCTACTGTTGTGAGTGGGcctggtaaaaaataaaataataaacaattagacatgattaaatgaaaaaagttcaAACTGA

Function

GO: NA

KEGG:

id description
K01530 E7.6.2.1; phospholipid-translocating ATPase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252747.1 lncRNA downstream 13241 14633214 ~ 14638332 (-) True LOC122359963
TU166357 lncRNA downstream 14180 14635563 ~ 14637393 (-) False LOC122359963
TU166341 lncRNA downstream 63704 14582479 ~ 14587869 (-) True LOC122359961
TU166339 lncRNA downstream 68261 14582479 ~ 14583312 (-) False LOC122359961
TU166340 lncRNA downstream 68261 14582479 ~ 14583312 (-) False LOC122359961
TU166370 lncRNA upstream 37458 14715216 ~ 14715491 (-) True G112686
TU166909 lncRNA upstream 214282 14892040 ~ 14892395 (-) True G113034
TU166910 lncRNA upstream 221424 14899182 ~ 14904907 (-) True si:ch211-105c13.3
TU166911 lncRNA upstream 221424 14899182 ~ 14904907 (-) False si:ch211-105c13.3
TU166915 lncRNA upstream 268837 14946595 ~ 14947384 (-) True G113039
XM_043260201.1 mRNA downstream 681 14643888 ~ 14650892 (-) True il6r
XM_043260210.1 mRNA downstream 68224 14582479 ~ 14583349 (-) False LOC122359961
XM_043260209.1 mRNA downstream 68224 14582479 ~ 14583349 (-) False LOC122359961
XM_043261481.1 mRNA downstream 70331 14568314 ~ 14581242 (-) True otoa
XM_043261381.1 mRNA downstream 94508 14544847 ~ 14557065 (-) False setdb1b
XM_043260203.1 mRNA upstream 5070 14682828 ~ 14688168 (-) True aqp10a
XM_043260200.1 mRNA upstream 9973 14687731 ~ 14697088 (-) False si:dkey-92i15.4
XM_043260199.1 mRNA upstream 9973 14687731 ~ 14694809 (-) True si:dkey-92i15.4
XM_043260202.1 mRNA upstream 24140 14701898 ~ 14714966 (-) True tuft1a
XM_043260412.1 mRNA upstream 39306 14717064 ~ 14719580 (-) True LOC122360089
TU166030 other downstream 349954 14234554 ~ 14301619 (-) True G112478
TU165859 other downstream 967664 13654060 ~ 13683909 (-) True zgc:92606
TU164609 other downstream 3239796 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 3365141 11270664 ~ 11286432 (-) False G111450
TU164397 other downstream 3785145 10861951 ~ 10866428 (-) False LOC122360812
XR_006252733.1 other upstream 231567 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 790722 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 790722 15468480 ~ 15496375 (-) False rps19
TU167051 other upstream 790722 15468480 ~ 15495722 (-) False rps19
TU167049 other upstream 815063 15492821 ~ 15496375 (-) True rps19

Expression Profile