RNA id: XM_043260203.1


Basic Information

Item Value
RNA id XM_043260203.1
length 3359
RNA type mRNA
GC content 0.37
exon number 6
gene id aqp10a
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 14682828 ~ 14688168 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACAATTCAGTCAATTTAACACTGTTTTTTCTATAAGGATTTTTGCTGTTACAGGTTCTATGAAGTTATAATCTTCAATTAGAAGTATCGTTCATTATAgtgttttgaagtgttttttttcttcactgataTGAGATCATATCATAACTATCATAACTatatcattctttttttcttactgaTATGACATCATATCATAGCTATGAATTAATAATGCCAAAATTAAAGGCATAAAAGCACTGGAGGCCAGGAGGTCATTTTTTTACAACACctcttttaaataatgtttaagcTCTTATATTATGTAactattaatgtaatattgcaCTATCAgtctttacagttttttaatgccactatgtatatgtgtatatgttgtCTGTACAGCACAAATCCGTCCCAATTAACTCTTTTTCATAATAAAGACAAAGAAATcaattatatttctttaatatgggatatttaaaacatttttatttatttattatttaaatatcagtaaCAGAAAATCCATTAAGAAATTTTAATTCGGCAGGGCAAggcaagttttcttttttaatataaatacatttttttatgctccAGCTCACAAATTCCATCCCTACCACCCTTTCATggcctttaaataaataaataaataaaagacaagtaaagacaaaaagtaaaaaagaaaaagcaacaaaTTGGTCTGATATATCTTTGTATTTTGTTAAATCAGCCTTTAAGCTGATCTTTTATTCCAACCAAGCAGAGAACAGTTAAGGTAATTTTACTCATCCTGTAAGAATATACTGTTTCAATTATTCCTTCGTTGCTATATTAGTgacattaaacatcattttaaacatgGATGGTGGCTTTGGGAAATAAAATTGGGTGCACAGATATATGAGCTAGATAATTGCACAATTACCTAATTTCTATGTCATCTAATCTTCCAGTGTCAAAATGATTAGATTATCTGGATGTACGGAAAAGCACGATAAGTGTTTTACAGCAGCAGATCATGGATTACTAattctttctctcgctctcttctcTATCTCTTTGTCCTACatgattattaatgatttattaaggGGTCGTAGTCTGGATCAGACAAGCTATGATGTGGATGTTGACTGCTTTATGTGGGACGTTTGTACCCTGCAAGTGTATTTAAAAGAGGGTTTAAAGGTTAGCTGAGCTAACAGACACAGACTAAGGTCAGGGGATCATCTCAGAAGAGCAGGACGGCAGGTTTTGCACAAAACGTAAAAGCCAATACTGAAAATGAGTCGGgtaaaaaagataattaaaaggATGAAGGTGAAAAATGAACTGGGGCGACAGATATTGGGAGAGGTCTTAGGGACCTTTGTACTTCTGCTGTTTGGTTGCGCTGCAGCAGCTCAGGTGAAAACCAGCAGAGAAACTAAGGGGCAGTTTCTGTCTGTTAACATGGCTTTCTCTGTAGGTGTGATGTCTGCCATGTACCTCTGCAGGGCAGTATCAGGAGCTCATCTAAACCCAGCTGTGTCTCTGAGTTTCTGTGTCTTGGGAGACCTAGCCTGGATAAAGCTGTTACCCTATTCTCTGGCTCAAATATTCGGTGCTTACCTCGCCTCTGGACTTGTCTATCTCATCTATCAtgATGCAATTATGGAGTTCAGTGGCGGAGTTCTGACCGTATTTGGTCCTAATGAAACAGCCAGTATCTTTGCCACTTACCCAACTGATGTGGTGTCAATGCAGACCAACTTTCTTGATCAGGTGGTTGGCACAGCCATGCTGATGTTGTGCATCCTACCTCTGAACGATAAGAGAAATGCTCCTGCTCCTGAAGCGCTGCTCCCTCCAATTGTAGCAACTGTTGTCCTAGGGATTTCCATGTCAATGTCGGCTAACTGTGGAGCTGCCATAAACCCTGCCCGTGACCTCGGTCCACGACTCTTCACCTTCACAGCAGGCTGGGGCACCGAAGTCTTCACGTGCTATGACTACTTCTTCTGGATACCATTAGTGGCTCCTATGGTGGGGGGCGTGCTGGGATCCATCATTTATCTGGTCTTCATTCAGTGGCATCTGCCTGAGCCTGAGGATGAAACTGAGACTGAGGAGTTTAATGAACAAACAAAGGTCACGgagcacaacaacaaaaaggacaCGTTTTTCCAAAAAATGTCTGCGCTTTAAAGGAGTAGGGATCTCATTTCCAGATCCTGTTTCCCCTCTTCTCCACATTATTTCCCAGactgttttatactgtaaataaacaaaaaggcCAAGCACTGGGGATGATGCACAAGGTGGACTCCTAAATCTTTCACCGGAGAGCTGAAGCCTTGATATAgcaattgttatttattatttcaaaatattaaactggGACGTACTCTCAACAACATGTAGAAAATTACTAATTGGCTTTCACATTGTCCATTGTTTCACATAAGTGGAATTTGTATATAGTAGGCTATGTATAgtattttagctattttattcTAGACCAGTGGcagctatacacacacacacacacacacacacacacacacacacacacacacacacacacacacactatatgcTATATGTAATCTTTCAgaaatgatattaatataacCACATCAAACTCTCACATCTGTTTGTTGTCTAGTGCTCTTTCTAGTGTATTTTGCAAGCAGAGATTGTTTATGTTACACCACTATTACAGTGCACACTTCTGTGGTGTACATTAACAGGTTCACAAACAAAGAGTTTTAAAAACCTGTTTGAAGCCACTATTGAGCAAACATTTATCTGAACTTTTGGGGAAGAGGTATATTGATTATATGTACTCAGAAGGTCACATCCCTACCATTTCATGGAATATTCTCTGTTGTGagcaatgcattaaattaaagatCTTGCTATTAATGTCAATACAATATAATGTCAATAATAACTGCAACCATACAGCAAGGAATATAATCAAGCCATCTTCTGTCATGAAAAGGTTTTGGTAATATTACTGATGGGGGACTTGTTTGAGCAGAGTCGTTTTGAGAAGGTTTATGAGAATGTTTGCTTAGCGTTGAGAGACATTAGCTCGCAAAATGCGACAGATTTGCcggttctgttctgtttttacgGAAACACTGTCCAGATGCGTGGGTAAATATTCacaacaatcattttaaacGTGTGTAGGTGTAAGCCATCATTCGCAAACTTTAGTTTAACAGCGTCCCTTCAAAATTCACCTCAGGCTCGCACATGCGCacatgtaatctttttttttttttttttttttttttataacaatggCAGCAGACAGATAACAGGAAAGACGGAAAGGGTGTTGTCTAATTCTTGaaagaataaatacacaatttatttta

Function

GO:

id name namespace
GO:0015793 glycerol transport biological_process
GO:0034219 carbohydrate transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0071918 urea transmembrane transport biological_process
GO:0015698 inorganic anion transport biological_process
GO:0006833 water transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015168 glycerol transmembrane transporter activity molecular_function
GO:0015204 urea transmembrane transporter activity molecular_function
GO:0015105 arsenite transmembrane transporter activity molecular_function
GO:0005372 water transmembrane transporter activity molecular_function

KEGG:

id description
K09886 GLPN; aquaglyceroporin related protein, invertebrate

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU166328 lncRNA downstream 28678 14591362 ~ 14654150 (-) True G112659
XR_006252747.1 lncRNA downstream 44496 14633214 ~ 14638332 (-) True LOC122359963
TU166357 lncRNA downstream 45435 14635563 ~ 14637393 (-) False LOC122359963
TU166341 lncRNA downstream 94959 14582479 ~ 14587869 (-) True LOC122359961
TU166339 lncRNA downstream 99516 14582479 ~ 14583312 (-) False LOC122359961
TU166370 lncRNA upstream 27048 14715216 ~ 14715491 (-) True G112686
TU166909 lncRNA upstream 203872 14892040 ~ 14892395 (-) True G113034
TU166910 lncRNA upstream 211014 14899182 ~ 14904907 (-) True si:ch211-105c13.3
TU166911 lncRNA upstream 211014 14899182 ~ 14904907 (-) False si:ch211-105c13.3
TU166915 lncRNA upstream 258427 14946595 ~ 14947384 (-) True G113039
XM_043260197.1 mRNA downstream 5070 14651573 ~ 14677758 (-) True atp8b2
XM_043260201.1 mRNA downstream 31936 14643888 ~ 14650892 (-) True il6r
XM_043260210.1 mRNA downstream 99479 14582479 ~ 14583349 (-) False LOC122359961
XM_043260209.1 mRNA downstream 99479 14582479 ~ 14583349 (-) False LOC122359961
XM_043261481.1 mRNA downstream 101586 14568314 ~ 14581242 (-) True otoa
XM_043260202.1 mRNA upstream 13730 14701898 ~ 14714966 (-) True tuft1a
XM_043260412.1 mRNA upstream 28896 14717064 ~ 14719580 (-) True LOC122360089
XM_043261859.1 mRNA upstream 38917 14727085 ~ 14746625 (-) True LOC122360979
XM_043261772.1 mRNA upstream 208053 14896221 ~ 14899047 (-) True s100t
XM_043261773.1 mRNA upstream 211029 14899197 ~ 14900547 (-) False si:ch211-105c13.3
TU166030 other downstream 381209 14234554 ~ 14301619 (-) True G112478
TU165859 other downstream 998919 13654060 ~ 13683909 (-) True zgc:92606
TU164609 other downstream 3271051 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 3396396 11270664 ~ 11286432 (-) False G111450
TU164397 other downstream 3816400 10861951 ~ 10866428 (-) False LOC122360812
XR_006252733.1 other upstream 221157 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 780312 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 780312 15468480 ~ 15496375 (-) False rps19
TU167051 other upstream 780312 15468480 ~ 15495722 (-) False rps19
TU167049 other upstream 804653 15492821 ~ 15496375 (-) True rps19

Expression Profile