RNA id: XM_043260351.1


Basic Information

Item Value
RNA id XM_043260351.1
length 1395
RNA type mRNA
GC content 0.44
exon number 5
gene id mettl6
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21409959 ~ 21411772 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttctttatcgcCGCAGTAGCTTTTGCTCGAGTTAGACAGATGCTAAGTATATGCACGACAACATGCTGCGTTTTAAAACCACATTAAACATGCGGATATTTTACTCTTAATCATTTCGCAGGTTTAACATATATGTGGTTTAAGCGCATAGGTGTACCTGAAACCGTGTTTTACTAAACGCAAAGTGCTGTGTCTGTCACTATCGTAGAACTTCACAGCATCTTGTTTTAAGTCGTTTTCGGCAGTCATGTCGGTGACAGGTGAGTCGGACTCGCTGGAATCCAGTCCTGCTTCTCCCCATCAGTCCAGCGGTTTGAGCGAAAGGACCCTGACTCCAGAGGAGCTGGAGAAACTCAGGAGTGACCGCGTCTTAGTGTCCGACTTTAAGCAGCAGAAACTCGAAGTGGATGCTCAGAAGAACTGGGActtgttttataaaagaaacACGACACACTTTTTTAAAGACCGGCACTGGACTACCAGAGAGTTTGAAGAGCTGAAAAACTGCAGGGAGTCTCAGGGGCAGAAGCTGGTGTTATTGGAGGCTGGCTGTGGGGTGGGAAACTGCATTTTCCCTCTTCTGGAAGAAGATCTCAATATCTTCATCTATGCTTGTGACTTCTCTCCACGAGCTGTGGAGTTTGTGAAGcaAAATGCCTTGTATTGCCCCGAGCAATGCCTTGCGTTTCAGTGTGACCTCACTCAAGATGATCTCCAGGCCACAGTACAAGTGGAGACAGTGGATGTAGCCACTTTGATATTTGTTCTGTCCGCAATTCATCCTGAAAAGATGCAGAAGGCCCTGGAACACATTTATAAGGTGTTGCGACCAGGAGGTATTGTCCTCTTCAGGGACTATGGATTGTATGATCATGCCATGTTGAGGTTTAAGTCGGGCAATAAGCTGGGTGAGAATTTCTATGTGCGACAGGATGGGACCCgttcttttttcttctcaaagGAGTGCCTGGCTGGTTTGTTCCAAAAGGCAGGATTCGAGACTCTAGTGAACGAGTATGTGTTGAGAGAAACTGTGAATAAAAAAGAGGGTCTTTGTGTTCCCAGAGTGTTCCTGCAGAGTAAATTTCGCAAACCTATTCCATCATTATCACCAGCATAAgtcacatttttgtaaatgtatttttcgaAGTggcatgcattcatttattgtatttcagatacaatatttttagtcagatgttattttttactactaataaaatgtgtattttattaaaaaactgttggtttaattgattttttttttttaagttatgtgctcatttttaatgttcattttgtgAGTTGCCTTGCATGAGCTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGcggcccgggttcgattcccggtcaGGGAAC

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169954 lncRNA downstream 20812 21388815 ~ 21389147 (-) True G115098
TU169865 lncRNA downstream 78601 21331012 ~ 21331358 (-) True G115051
TU169853 lncRNA downstream 95213 21283464 ~ 21314746 (-) True G115042
TU169793 lncRNA downstream 289375 21118149 ~ 21120584 (-) True G114997
TU169792 lncRNA downstream 289419 21118149 ~ 21120540 (-) False G114997
TU169974 lncRNA upstream 194209 21605980 ~ 21614179 (-) False cenpw
TU170024 lncRNA upstream 413427 21825198 ~ 21825437 (-) True G115155
TU170039 lncRNA upstream 462055 21873826 ~ 21874051 (-) True G115170
TU170171 lncRNA upstream 818469 22230240 ~ 22237066 (-) True G115262
TU170280 lncRNA upstream 1271656 22683427 ~ 22683638 (-) True G115335
XM_043261819.1 mRNA downstream 991 21405263 ~ 21408968 (-) False cfap418
XM_043261820.1 mRNA downstream 992 21405628 ~ 21408967 (-) False cfap418
XM_043261821.1 mRNA downstream 995 21405963 ~ 21408964 (-) True cfap418
XM_043261010.1 mRNA downstream 44758 21360793 ~ 21365201 (-) True LOC122360424
XM_043260618.1 mRNA downstream 63359 21333650 ~ 21346600 (-) True nagpa
XM_043260090.1 mRNA upstream 1097 21412868 ~ 21431807 (-) True rspo3
XM_043260089.1 mRNA upstream 1097 21412868 ~ 21431805 (-) False rspo3
XM_043261465.1 mRNA upstream 194187 21605958 ~ 21614203 (-) True cenpw
XM_043260042.1 mRNA upstream 228326 21640097 ~ 21651111 (-) True trmt11
XM_043260130.1 mRNA upstream 242548 21654319 ~ 21656720 (-) True hint3
unassigned_transcript_2161 other downstream 934 21408944 ~ 21409025 (-) True trnas-aga_117
TU169949 other downstream 31123 21375890 ~ 21378836 (-) True G115093
TU169801 other downstream 392854 21012607 ~ 21017105 (-) True G115003
TU169673 other downstream 756385 20651977 ~ 20653574 (-) True G114901
TU169487 other downstream 957509 20441965 ~ 20452450 (-) False G114793
TU169979 other upstream 148450 21560221 ~ 21561060 (-) True G115116
TU169980 other upstream 148450 21560221 ~ 21561216 (-) False G115116
TU170010 other upstream 292247 21704018 ~ 21704959 (-) True G115141
TU170018 other upstream 389704 21801475 ~ 21803804 (-) True G115149
TU170105 other upstream 553084 21964855 ~ 21968535 (-) True G115207

Expression Profile