RNA id: XM_043260404.1


Basic Information

Item Value
RNA id XM_043260404.1
length 4043
RNA type mRNA
GC content 0.43
exon number 17
gene id mpp7b
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 8105226 ~ 8143954 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGTCATTATTGATGATGATCAAACTGCCTGGCAGTTTGTGAGTGAGCCTCTGTCACACTTCATGCTGAGTTTAGAAGTGACAACTTTCAGACAGGATCATTACTGGAACATCATTCTGCAGACCAGAGCGTTTATTTGTTGTCTTTCTGTGTACCATCATGATAAAGCCATCATCTGGACCAGGAGGTGTGTGCCGGTTGCTGGCCTCTTTGCTTTTTGGCCTAGAGTCTCATATGGACAACTCAGAGGAGAGCACTTTTCTACAGGACATGCTCATGGGCAATACTCTGCATCTGCTTATTAAGGTCTATGACAGGCTGCAGAAGTACAGAGCCCAGCGGCCTGCTCCACTGTTGGAAAGCACACAGGGCCTGGCTCAGGATTTGGCAAAAGAGCTGCTCTGTGTAGTCGCCAGCCCAGAGACAACAGAGTTGTTATACCTGCTCTCTAAACCTCATGTACAGGCTCTTCTCTCAGTGCATGACATGGTGTCTCAGAAAGAGTTTGACCCTAAATTGCCACCTCTGCCCCCACTGCCCGAACACATAGAGAAAGAGGAAGATTCAATCAAGATTGTTTGCTTGGTTAAAAACCAGGAGCCACTGGGAGCCACCATCAAGAGAGATGAGTCAACTGGAGCTATAGTGGTGGCTCGGGTCATGAGAGGAGGAGCTGCTGATCGAAGTGGTCTAATTCATGAAGGTGACAAGCTCAAGGAAGTCAATGGTGTTCCAATGGAGGACAGGAAACCAGAGGAGATCATTCCCATACTAGCCAAGTCAGAAGGAGCAGTGACCTTCAAAGTCATCCCAGGCACGAAAGAAGAGCCAGAGAACGTAGATAACAAGATCTTTGTAAGGGCACTTTTTCACTATGATCCCCAAGCAGATCCTGCTATTCCATGCAAAGACGCCGGGTTGGAATTCTGGAGAGGAGATGTGTTACAGATTGTAAGCCAAGAAGATGACACCTGGTGGCAGGCCAGGCAGCATGGTGACGCCAACCTCAGGGCTGGATTGATTCCCTCAAGACAGCTTCAGGAAAGGAGAGTGACTTTACAAAGGCCTGCAGTTCTGTTCCACCCACTGAGAGAGGCCATGATATATGTTGCTGGTTTGAGGAAAAGTTTCCGGTTGAGCCGGATGGACGGCACACGTCAACAGGTGAGACAAAAGACGGATGAAGGACATGCCGGAATCCATTTACCAATATATCAGGAGGTCCTGCCTTACAAAAGAAAGCCTGACGAGCCTTACCGCCTTGTGCTCCTAACTGggCCTAGTGGGGTTGGTGTGACCGAGTTAAAGAGAAGACTTCTACTCTCTGACCCAGAACACTTCAGTGTATCTGTGCCATataccACTCGGGAGCGGAAAAAGCATGAGAGAGAAGGGGTGGAGTACCACTTTGTCTCCAAACACACTTTTGAAAAAGATATCCTCAACCACAAATTTTTGGAGTATGGTGAATATAAAGGGAACTACTACGGTATGAGTCTGGATTCAGTGCGCAGGGTTGTAGCGGAGAGCAAGGTGTGCCTGCTGGATGTGAAGCCACATGTGAGTAAAAGCTTATACACCCCGGAGTTTAAACCCTATGTTATATTTGTGAAGCCTCCGTCAATAGAGAGCTTGAGACTGAGCCGAAGAAAAGCAAAAGTTTTGTCGAATCAGAATGAGCAAAcacctacaaaaatatttacgGAGGACGACTTTCGGAATATGATTACCAGTGCCCACGTCATGGAGAATAAATATGGCTACTTGTTTGAGAAAGTAATCATCAATGATGACCTGGCCGTGGCCTTCACTGAGCTGAGAGATGAGCTCACAAAGAtagaaacagacacacactggATCCCAAATACATGGACTCACGTCTGAAAAAGCAATTCATGTTCACTGAACCACTTAGACACGTGATAACTTTTGACTATGTTTTGGAGATTTTCTGCATATAAAAAAGGCACAccatattattgtaattatacgCTTATAAGTAGTGTGTGCTGGCCGGTCATGAATCAACTCCATTCATAACCGCCAAACTCATGACACTGCACTGAAGTTGAAATAGGTTTGTTTATGTTGAGAAACAAGTAATTGTAAAGAATTTTTATCTGCCCCTAATTCGTACATAATGATATACATTAGGCAGTATTACTAGATTATTTCTATACACATATTGCTTTGTGCACTGTTGTGGCTCACGCTTTGACATTAATCACTTACAGACGTGGATTTTCCATTGAAAAGATGTGTTCTCAATTTGGTTCAAGTGAGGTGGAgcattagtttcttttttttctttcgtaaATTGTGAATACAAGATTGAACTCTGGATTAGACCTCTGAAACACATCCAGGTAGCTTTATGAACCGAACAGTTCCAATCCAAGTTTATATGTGTTCCTGACATTGAACTCCAGGCTTCACAGTGATTTAAATGCCTTAGCGGTTTTGAAGAACATTACTATTTGCAGGTATACAAGGTGATCCATGAGTCAACCTCTCAAAAGGATCAATCCAACCTTAGCtgcttttttaaaggtttaaatctAGAAAAGAGCAACTCCCGTGGCAGTTCCTCCCAAATACTGCATTTAGAAAGATGAGCTGACATGGAAGTTAAGAGGAAGACGCTTGCTCAAGGTAACCTTAGTTGTTCTTGCGGACGCCAGAGGAGGAAGTGGATCATTTTCACCGGCCcttagcatattaaaatggaattaaAGAGTAACGGGAGAGTTCCTGGGGTTACATTGGATGGTTGCCTGATCAGTACAAGGGATAAAACTCATACCTGCCTGTATACCTGTCTGTGAAGCCAGAATGAAAGGTTTTTGATTGATATTGTGACAGACTGTGATCAAAAATTTGattaataatgtcaaataataataatgacaaattttTACACGTGGTTTGCCACTGGAAGCATAATCAGCTGTCATGTGCTAGGTTAcgcacatttcagtttattgcTCTTGCTACATCTGCAGTCCTCATGCGTCCCTGCGGCAGGACTATAGCACGTTCATGCAGGTGAGCAGAGTCCCTGGGCATCTTTCTTCTGGTGTTTTCAGAATTAGTACAAAGGTGTCTTTAATGTCATAATGTAACTGTGACCTTAATCGCCTGCCATCTGTAAGCTGTTAGTGTCTAAAAGGCTGTTCCACGGGCACATGCAATATTAGTTTATGCTTCATTGAACAAGCATGTCAAACATTGTTTAAACACTTTTCAATAAATATCTGTAAAACTTATgtgcaaattaataattatgattagGATCATTTTTAGTTAAAGGTGTTAAAGGATCTGGCCCAGGTTTGACCACCTGCTAACCATGGCTACACATCCTACCAGCCTCAGAGGGAGCTGTTTAAAAAGAAGGCCAACACGAAGATCTCTTCAGCACCGTTCTTCTGGCTTTGAACAGCGGTAGAGATGGTGAATCATAACTTGTATCTTGGAGTTTTCTCCAGCTCGTTGACACAAGCTTCGTTGTAATTTCTTTGTAGGAATCAATTGCTTTCTCTGCAAGCGATTCTACAGGTGCAACTATAGGCTATCTGTGGCAGCTCAGCTATATATATAGTGACTTGGAGATGTTACTCACTCGCCTGGCCTGAGCAGAATGAGAAACAAACCGGGAAGAAAATATTCAGCGTCAAAGAAGGTGGAGTTTCAGATCGCGCCCACCGTTTGCATAACAGCCCCTGACTTATGGTAGCACAAAGGTGTTTATGAGCTAAACAAATTCCCCAAAAGGTTTGCTTTGTTGAGCCGATTCGAACTGCCAAAACAAACTTTGTTTTGGCCTGATTTTGTTGAAATTacttcatttcagttcattttttgATTCGATTTTAAGCATATCGGGGGCCTTGAGACATGAGACTGAGCACTAACGCAACCTTTCATTTCTCCCTCAGACAGCAGCAAAAGACCGATCAGCCCCACAGGAAGAAGGAAGAGAGCACCCACGGCACCAGAGCACCTATATCCATCTGTCCCTTTGCACATTCCTTGTAAATAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163299 lncRNA downstream 21401 8083369 ~ 8083825 (-) False mkxb
TU163295 lncRNA downstream 21926 8082900 ~ 8083300 (-) False mkxb
XR_006252839.1 lncRNA downstream 112359 7988950 ~ 7992867 (-) True LOC122360778
XR_006252846.1 lncRNA downstream 144851 7958881 ~ 7960375 (-) True LOC122360975
TU163265 lncRNA downstream 145188 7959291 ~ 7960038 (-) False LOC122360975
TU163329 lncRNA upstream 90954 8234908 ~ 8235793 (-) True G110546
TU163331 lncRNA upstream 93804 8237758 ~ 8239176 (-) True G110548
TU163610 lncRNA upstream 403828 8547782 ~ 8551552 (-) True G110753
TU163615 lncRNA upstream 403828 8547782 ~ 8551552 (-) False G110753
TU163638 lncRNA upstream 445944 8589898 ~ 8590634 (-) True G110773
XM_043260483.1 mRNA downstream 12771 8082906 ~ 8092455 (-) False mkxb
XM_043260482.1 mRNA downstream 12771 8082906 ~ 8092455 (-) True mkxb
XM_043260585.1 mRNA downstream 30922 8067575 ~ 8074304 (-) True LOC122360189
XM_043260586.1 mRNA downstream 32346 8069000 ~ 8072880 (-) False LOC122360189
XM_043260656.1 mRNA downstream 52041 8005718 ~ 8053185 (-) False mib1
XM_043260193.1 mRNA upstream 51147 8195101 ~ 8200339 (-) True adipoqb
XM_043261660.1 mRNA upstream 95377 8239331 ~ 8256537 (-) True LOC122360799
XM_043261753.1 mRNA upstream 152072 8296026 ~ 8298481 (-) True LOC122360914
XM_043261729.1 mRNA upstream 197646 8341600 ~ 8363640 (-) True LOC122360896
XM_043261737.1 mRNA upstream 290692 8434646 ~ 8451791 (-) False pals2a
TU163302 other downstream 12873 8090651 ~ 8092353 (-) False mkxb
TU163187 other downstream 274509 7828820 ~ 7830717 (-) False LOC122360680
TU163145 other downstream 486641 7610629 ~ 7618585 (-) False cdkal1
TU163147 other downstream 486641 7610834 ~ 7618585 (-) False cdkal1
TU163032 other downstream 903845 7195490 ~ 7201381 (-) True LOC122360222
TU163327 other upstream 72075 8216029 ~ 8216595 (-) True G110544
TU163340 other upstream 154835 8298789 ~ 8302245 (-) True G110554
TU163343 other upstream 168311 8312265 ~ 8316685 (-) True G110556
TU163623 other upstream 489396 8633350 ~ 8636222 (-) True wu:fj39g12
XR_006252934.1 other upstream 503460 8647414 ~ 8647555 (-) True LOC122361375

Expression Profile