RNA id: XM_043260466.1


Basic Information

Item Value
RNA id XM_043260466.1
length 2151
RNA type mRNA
GC content 0.44
exon number 2
gene id gpr20
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18368344 ~ 18372917 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aaaaagtgtcTACACGTCCAGCAGTATTAATACATcctgtcatttgttttatcTGTCTTGCTGGCATTCTGGCACCTTTAAAAATCTATACAGAGCACTTCATAAAGGAACGTTTTGTGACGGCTAATAACCATGCATTatcatttttagcattaattgtgttttatctAGCCCCAGGttttgtttatgtggtttaaagCTATTTTCCTTCAAATATTCCTAACATTGTATCAAAAGCGTGTTGAATTTTATATTAGTAAACCACAGAGAAAACAAGCCCTGTAGGATAAAAATCATATCCCAGAATCCAGTGTTTGTAATGTCAGGGTTTATCCAAACGAACTCTAGCTTCCTGTGAGCGAGAGGATGAAGGGAGGGAAGGAAACAACAAAAGAGTGAAacaggcagagagagacagaaaaagagacatGCAACATAGACCAGGTGGACAGACTCTTCTTTTTGCCTCTGAAAGGGGAAGATGTTCAGCATGTTTGTAGCGCATGGGATTGGTTTTTCATCATTTACGTTTCTTTAAGAGGTTTAGGGGGCATTTTAGGCTCTAATTTGAGTGTCCTTTGTTACAACGCTTCTGTTTCACACTCCACAGATCCAGATTCTCATCTGTCTTCATGTGCAGacCCAGCCCTCAAGTCACAGAGATGACCCTTACGGAGGGTTCACTGAATCTGAACCTCACACCAACATCAATTCCTCCCCTAACAACCAATACTTCTCCACCATACCGTGAACCTTATTTACACAGACTGGCCCACTTGGACGAGGGTCTATATAATGACTTTTACAGCCTGTGGATAGCCCTTGTGGTCATCAACGCCCTAATCTTTATGGTGGGGATGACCCTTAACAGCCTGGCTTTGTACGTCTTCTGCTTCAGGACAAAGCCGAAGACCACGTCGGTCATCTACACCATTAACCTGGTGGTGACTGACCTGTTGGTTAACCTCTCTCTTCCCACTCGTATCGTATTGTACTACAGCGGAGGAAAATGCCTCATCTGTTCCTACATGCACATATTCAGCTACTTCGTCAACATGTACTGCAGCATCCTCTTCCTCACCAGCATCTGCGTGGATCGCTACCTGGCCATCGTTCAGGCCGAGGCCTCGAGGAAGTGGAGGAACCCCGGTGTGGCAAAAGCGGTGTGCGCCTGCATCTGGCTGTTCGCCATCATCGTGACCTACTCGCTGCTCACCACAGCCTTCAAGCACTCAGGCTGCTGCCTTTCCAAACTCTTCGCGCTGACTGTTTTTGAGTTCTTCCTACCAATGGTGATCATCGTAGCATTTACTGTTCGGATCATGTGCGCCCTTTCCAGCCCGGGCCTCATGCAGCAGAGCCGAGACAGACGCATGAAAGCCGTACAGCTGCTGTCCACCGTTCTGGTGATCTTCACAGTCTGCTTCACGCCGTTTCACGTCCGTCAAGTTCTGTTTTACTTCCATCCTGATTTGCCTCATCATGTGATCGTGTACCATGTGACCGTCACCCTCAGCAGCCTGAACAGCTGCTTGGATCCTGTGGTCTACTGTTTCGTCACCACTAACTTTCAGTCTACCATGAAGAGATTTTTCAGGAAGATGGAAAGAGAGCAGACGAGCGGGGACATTATCAGCGTGCAGAAGAGCTCGAAGGCTTCGGGCACAGTGATTGCTATAGCTAATAGTATAAGGATAAGCATGAGCCCCGTCCAGCAGGGAAGCCGACCCGCATGAGGAAGCCCTCATTCAGATGGTTGCCATTACCGTGTCATACCAAAGCAAAATCAGTAACATAAATGAACGTTTGTGACTTTGTTTCGATGTGTACTGTAAATACTTTGATGTAGAGATATCTTTTCAAACGTGATGCTGTAACTATTACAATTACGCGCCAAATGCCACCGTAATATGCTACAGCATTTTTAAGCTTGCAGTGCTTTaaagcagtggttttcaaaaacaattatgCCCTCTTTGAGGCAGATGTATCTGTAGTGTGCGTATCAAGACGCATAAAGACTTATATAATGTCAATGTACTGAAgccaaaacaaattattaaaactttggaatatatttgcttttgtatctactgtatattttttctaCCAACATTTAGAGTTAAACTAgatgtacattattatttaaaa

Function

GO: NA

KEGG:

id description
K04317 GPR20; G protein-coupled receptor 20

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU168395 lncRNA downstream 129075 18195515 ~ 18239269 (-) False lmna
TU168370 lncRNA downstream 173176 18164406 ~ 18195168 (-) False LOC122360777
XR_006252837.1 lncRNA downstream 178743 18163340 ~ 18189601 (-) False LOC122360777
XR_006252838.1 lncRNA downstream 178743 18163340 ~ 18189601 (-) True LOC122360777
TU168354 lncRNA downstream 252462 18095740 ~ 18115882 (-) True G114035
TU168419 lncRNA upstream 1051 18373968 ~ 18375614 (-) True G114075
XR_006252807.1 lncRNA upstream 155954 18528871 ~ 18544680 (-) True LOC122360486
TU168638 lncRNA upstream 175271 18548188 ~ 18548939 (-) True G114231
XR_006252842.1 lncRNA upstream 314249 18687166 ~ 18688395 (-) True LOC122360941
TU168682 lncRNA upstream 366837 18739754 ~ 18740829 (-) True G114259
XM_043261101.1 mRNA downstream 1071 18357417 ~ 18367273 (-) False slc45a4b
XM_043261102.1 mRNA downstream 1128 18357417 ~ 18367216 (-) False slc45a4b
XM_043261104.1 mRNA downstream 1354 18357417 ~ 18366990 (-) False slc45a4b
XM_043261103.1 mRNA downstream 1354 18357417 ~ 18366990 (-) True slc45a4b
XM_043260057.1 mRNA downstream 14247 18341291 ~ 18354097 (-) True dennd3b
XM_043261353.1 mRNA upstream 3747 18376664 ~ 18390138 (-) True dgat1b
XM_043260321.1 mRNA upstream 86828 18459745 ~ 18463326 (-) True scrt1b
XM_043260629.1 mRNA upstream 119709 18492626 ~ 18520287 (-) True mroh1
XM_043261118.1 mRNA upstream 179720 18552637 ~ 18557855 (-) True zgc:194210
XM_043261115.1 mRNA upstream 185814 18558731 ~ 18565123 (-) True csnk2a1
XR_006252805.1 other downstream 1354 18357417 ~ 18366990 (-) False slc45a4b
unassigned_transcript_2159 other downstream 1377970 16990302 ~ 16990374 (-) True trnat-ugu_49
TU167506 other downstream 1686166 16680197 ~ 16682178 (-) False esrp1
XR_006252795.1 other downstream 2128838 16232972 ~ 16239506 (-) False fam8a1b
XR_006252800.1 other downstream 2139878 16218661 ~ 16228466 (-) False atxn1b
XR_006252779.1 other upstream 119709 18492626 ~ 18520287 (-) False mroh1
XR_006252778.1 other upstream 119709 18492626 ~ 18520287 (-) False mroh1
TU168645 other upstream 276602 18649519 ~ 18650609 (-) True G114236
TU168660 other upstream 296764 18669681 ~ 18671245 (-) False LOC122360747
TU168665 other upstream 320995 18693912 ~ 18698316 (-) False LOC122360940

Expression Profile