RNA id: XM_043260582.1


Basic Information

Item Value
RNA id XM_043260582.1
length 3671
RNA type mRNA
GC content 0.47
exon number 9
gene id kcnn4
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15735273 ~ 15753910 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CATTACGTCATTCCTAGAGGAAGACAAGCAAGGATTTGCGCATAGAAATAGAATCTGCTTCAGTTCATTGGGTTTGAAGGAGGTGGATTGTAAACGAAGAGGAGAGAGCGACAGACCTCGTGGCCACGCATGTTTAGTTTCCGAGTTCCTGTCCCTCTTGAGTTCGTTATGGAAGTGACAATTTGATGTTTCGTGCTCCTGCTGTTTGAGGTCCACCTGCCAGCAAAGCAAGGCCTGACCTCGTATTTAATTCTTAAGAAGAAAGGCTTCGAGTCTTAACTGTatattcattttacatattgTGTAACTGGTGCTGTGAAATGTTTCAAAAGGCTAACCTCGTAAACTAAAACTTGTTGCTAAACACGCTAGTAGGGTTAACCATAGCACAATAAGTTACCAGCCTATCGTTGCAATTACTCGGGCGGTGCACTTACATGACTAATGCCGTCAGTATTTAGCTTGGGCCTACCTAAAAGAAATATGCTTTGAATGCATATACAATTAATCTAGTGATGTCATTCGTGAGCAGATTGTTCCCCGAAAATACACAACCTTAATTGGAGCACTGGACCTATATACAGTCAACTAAACCGTTAGTCTTGCATTAAACGGGTCTAACACTAGAGGTACCCCTCTGGCAGTGTCTGCATTGACTGTATTTTCTGGCTCAAACGCGCAAACACGAGCTATTAAACACTTCATTCTAACACTTGAGAATATCTGGGCAACCGTCGGgaactttactgtcatttaacTTACATTTAGCTTTGCCTTTGCGCTGGTCTCGGACTGTAGCTCTTTGAGACCCAGGCGTGAACGACGGTTCGCTGAAAGAAACACTCATGACAACAAACGAAGAAAAACCGTATGTCACAGTCAACCTTTAGGCGACACGGCTTGCTGCAGTCCATCCACAGCTTAGCCTACGTAAGAGCGCTACTTCACAGTGAACAGTTTCAGAGCGCCTTCCCACAGACCCAAGTCAAACGCTGAGGCGCGTAACAGTGTAAGTTCGCAGGTAGGAGCGCGCGTTTCGGTTTTCACTCCGTGCTTTGAAATACTTCTTGTCTTCAGCGTGCTATGCCTTCCGAAATTTTGGTCGGAGAGGGGGAAGGACAGGATGGAGAACAAGGCGACTGATGTCTGTACGAGCTGAAGACGAGAGCGCGCTATGGAGATGACCGCTCGCCTTGCGCACTCGGACGCCAAGGTGGATGGCAGAAACTGTGATGGACTTGTCAACCACAACGGGGAAACGACGGAGATAAGAGTGCCGCTGTCTCACGCGGGGAAGAGGCTCAGTCCGATCGAGGGGGGGAATCTTTACAGACTGCGTGACAGAAAGTTCCTTTTGGAGGACAAGAAGCGCCTCTGCGCGTGGGCACTGGGGACCGCGGTGTTAGGCATTCTGCTGATGGTATTACATGCTGAGCTGTGCCCAGTAGTGTATCAACCAGGATCCATATATGCCCTCTCCATTAATGGTCTCATCAGTTTCTCCACGGGGTGTTTGCTCATTCTCATCATCGCTTTCCATTATAAAGACATCAGACTTTTCATCATTGACCACAACCAGGTGGACTGGCGCATTGCCATGACCAGCAACCGGGTGCTCGGCATCTCCCTGGAGCTCGTTGTCTGCGCTATCCATCCCGTGGCTAACTACCTGAGGCCCGACATGGAGGACGGAGTCTGGGAGAAGCCAGAGCAAAACTCCTCTACCCCCCTCTGCTTGTCCTCCAGTCACAGAGCAGTCATGCTGGATGTGGAGCTGCTTCTTTCGGCCCTCATGTTCCTCAGGCTCTATCTGGTGCACAGGGCCGTCCTGCTACACAGCAAAGTGCTCCTCAGCGCCTCGTACAGGAGCATCGGCTCCCTCAACAACATCAACTTCACCTTCCGCTTTGTGCTCAAGGTGCTAATGAACAAGTACCCGGCCCGCACGCTGCTGGTCTTCATTATGTTCTTCTGGCTCTCCGCTTCTTGGATGCTGCGACTGTGTGAAAGGCAGCAGCAGGTAGAGACAGGCGGCATGGATACAGCATTGTGGCTCATAGCCATCACTTTCCTCACGGTGGGATATGGAGATGTGTCCCCTCACACCAGCTGTGGCAAGGTGGTGTGTCTATTCACAGGTGTCATGGGTGTGGCATGTACTGCTATGTTGGTAGCCGTCATGACTAAGAAATTGGCGCTTAACAAAGGAGAGAAACATGTGCATTTCTTCATGATGGACATTCAGATCTCCAAGCGGATCCGGCACGCAGCAGCCAACGTGCTGAGAGAATGCTGGCTGCTTCATCGCACCACCCAGACAAAAGACAACAGCGGAGAGCATCGTCATCACCAGAGACACCTGCTGGAGGCCATCCGTGTATTTCGTAACCTGCGGTTGAAGCAGAGGAAGTTAAGAGATTTTGCCAGTGAGATGGTGGATCTCTCGAAGATGCAGATGATCATGTGTGATCTGAGTGCGAACTGGAACAGCTCTTACCATGAGCTTGAGCAGCGAATCATCTCTATGGAGCAGAAGCTGGACGAACTGGGACGCTCGTTTCAGATCACCTCGGAGCTGCTCACACAGGCGCTACATCGCCGCAGACTGGACCACAGGTGACCTGTGACATCTCTACTGAAGGCTTGTGTAGTCTTCATCCTCAAGCCTCTTGAACTGACGGAGGGACTTTATGACAAACTTCAAAAGGACTGAGAGCAGCAACGACCTCTGCAGACTTCCTTTTATTTTCGCGtgtatttatgaacatttcctCATTGCTACAAACACGAGCTTgggaaaaaaggtcattttgcttattttaaacttttgacTTCTAATTTTCAGTCTCAGTTTATGATTGATACCGAAACTATGAGACGGAGATTCTGGTGTTACACTAAGGAACAATTTTAGATAGAAGAACCATGAAACTTTTTACAGTTCCTGTTTGTAGGTGAGACTGCGGAAGTTAGTCTTTCATCTCAGAAGTGGGAAATATGAATCAAATAACCTAATGGCTCTAATCTGATGCACTATTTTCCAGTTATGTGCGTATAACCTGGTAATGACATGCTGATAAAGGTCTGTGTAACTTGCTGGCAACTTTTTCAAAGATAAGTCCGATAAATTGTCGAGGATAAGCAGACTTCCTCACAGACTTGTACACTGCTATTTTTAGAACAACCTTAATTGAGGCAGAACCACCTGCACCCAAAGTAccccaataaaaaaatctgggAATGACTTGAATTTCCATTAGCCCTTTAACCTGACAGGGCATCTGTTGAATGACGGCATGTGGCGGCTCTAATTACACCATGAAAAGGTTTTGCGTAGTACGGTATTCAGAATACTGGTGTAACGGAAAAATCTTTATTGCTTGAGCCtgtatttaagtttattaagACAGAGGCTGTCAGTCGTCTCTGGTATCTCCTCCTGGTGGACAAAATATGTGTTGCATGTTTGGCCATCATTCCTGTTAAGACTGTGCTTGTCCTGTATCGTTTGCGCTGAATATTTTCGAAATAGATTAGATGTGTATGCTGTATAATGATCATATGAGGGCAGTGGGTATACGAAAAGAGGTCAGGTCTGTTGTATGTAGttcttttataaacaaattgaaATTTTGCCTTGGTTTTACTGCTGTCTTTGCGTATTTGAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU167117 lncRNA downstream 17387 15709738 ~ 15717886 (-) True G113168
TU167130 lncRNA downstream 29214 15705823 ~ 15706059 (-) True G113179
TU167112 lncRNA downstream 63154 15665236 ~ 15672119 (-) False fxyd6l
TU167110 lncRNA downstream 64262 15665236 ~ 15671011 (-) False fxyd6l
TU167138 lncRNA upstream 9559 15763469 ~ 15763745 (-) True G113187
TU167205 lncRNA upstream 152323 15906233 ~ 15906830 (-) True G113232
TU167204 lncRNA upstream 153189 15907099 ~ 15908673 (-) True G113231
TU167216 lncRNA upstream 157402 15911312 ~ 15946683 (-) True G113236
TU167209 lncRNA upstream 175312 15929222 ~ 15958664 (-) False G113234
XM_043262060.1 mRNA downstream 10944 15722112 ~ 15724329 (-) True LOC122361102
XM_043261694.1 mRNA downstream 14150 15719163 ~ 15721123 (-) True negaly6
XM_043261581.1 mRNA downstream 31093 15699733 ~ 15704180 (-) True LOC122360743
XM_043261582.1 mRNA downstream 38668 15693764 ~ 15696605 (-) True LOC122360744
XM_043261580.1 mRNA downstream 42014 15688497 ~ 15693259 (-) True LOC122360742
XM_043260584.1 mRNA upstream 271 15754181 ~ 15759667 (-) True si:dkey-79d12.5
XM_043260368.1 mRNA upstream 45176 15799086 ~ 15804702 (-) True has1
XM_043260373.1 mRNA upstream 113394 15867304 ~ 15869211 (-) True prss1
XM_043260718.1 mRNA upstream 182737 15936647 ~ 15938890 (-) True lratd2b
XM_043260914.1 mRNA upstream 205759 15959669 ~ 15963708 (-) False prelid3a
TU167048 other downstream 238898 15468480 ~ 15496375 (-) False rps19
TU167050 other downstream 238898 15468480 ~ 15496375 (-) False rps19
TU167049 other downstream 238898 15492821 ~ 15496375 (-) True rps19
TU167051 other downstream 239551 15468480 ~ 15495722 (-) False rps19
XR_006252733.1 other downstream 821627 14909325 ~ 14913646 (-) False LOC122359907
TU167155 other upstream 63069 15816979 ~ 15819086 (-) True G113203
TU167180 other upstream 103689 15857599 ~ 15861893 (-) True G113220
TU167269 other upstream 259054 16012964 ~ 16013751 (-) True G113275
TU167253 other upstream 385409 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 464751 16218661 ~ 16228466 (-) False atxn1b

Expression Profile