RNA id: XM_043260661.1


Basic Information

Item Value
RNA id XM_043260661.1
length 6841
RNA type mRNA
GC content 0.40
exon number 17
gene id grb10b
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9947351 ~ 10010750 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCGAGTGGGCGGAGACTTTGGGATCCTGACAGCGTCCAGCGCGcagcagcacacacatacacacacacactcacacatttacAGTGAATAAGACGCGGTTGTTCTGCGCTATAGAGAGACTCTTTCTTCATTTATCTGAGGTGGATGTGATATACGAGAGACACATTAAAAAGCGTGTGTCATGGCTGTGGCCGGATGCCCGGATTATTTTCTACACCATCCAAATTACCAgGATAAAGTAGACCGAGCTGCCAATCACAGACAGGCAGATTTGATTGGACCAGGTTTTCAGCAGTCAACCAATCGGAATTCACCCAACCATCAAGaAGATGACGTGGATCTGGAGGCTCTGGTGAATGACATGAACTCGTCCTTTGAGAGTCTGTACACTTCTTGCAGTGTACAGGCAGAATCCACTCCACTGCTGCACAACGGCCAACCACATCGCTCCGCCACCTATCAGACACAGGCTCAGCCCACCTCCCCGCACCAGAGACTGTGCCGGTCCCAGCCCATGCACATCCTCGCTGTCAGAAGACTTCAGGAAGAGGAGCAACAGTACCGAACGTCCTCTCTACCTGCCATCCCTAACCCCTTTCCTGAACTCTGCAGCCCTGCCAGTTCCCCTACACTCAGCTCTGGCTCCTTACCTCAGTGTCAACCCTCAGGCAAATATATCATAAAAATCTTCAGCGAGGATGGGATGGGAAAGGTGGTGGAGATCCCAGCCGACATGTCGGCGCGAGACCTGTGCCAGTTTCTCGTCTATAAAAACCATTGTGTGGACGATAACAGTTGGGCGCTTGTGGAGAATCATCCAGCCCTGGGACTCGAGAGATGTTTAGAAGACCATGAACTGGTTGTTCAAGTGCAGGCGTCAATGACCAGTGAGAGTAAATTTCTCTTCAGGAAGAACTATGCCAAAtatgaattctttaaaaatcctTTGAACTTCTTCCCAGAGCAAATGGTTGCCTGGTGTCAGGAAACGAACGGGACCATCCCCCCATCTCAGCTCCTGCAGAACTTCTTAAACTCCAGCAGTTGTCCTGAGATCCAGGGATATTTGTACGTGAAAGAAATGGGCAGGAAATCATGGAAGAAACTGTACGTGTTTTTAAGACGGTCAGGGTTGTACTTCTCAACAAAAGGAACGTCAAAGGAGCCCAGGCATTTACAGCTACTAGCAGACCTGGAGGACAGCAATGTCTTTACAGTAATAACAGGGAGAAAGTTGCACAATGCACCGACTGACTTTGAATTCTGCATAAAACCTAATAAAGTAAGGAATGAAGTGAAAGAACTGAGGATGTTGTGCGCAGAGGACGAGCAGAGCAGAACATGCTGGATGACGGCCTTTAGACTCTTCAAGTATGGAATTTCGCTCTATCAAAATTACAAGATCCCCCAGCAGCGAAAAACCTTGCTTTCACACTTCTCCGCTCCTGTGAGGAGTGTCTCAGAGAATTCTCTGGTAGCCATGGATTTCTCAGGGAGGATAGGCCGAGTGATTGACAATCCTGTGGAGGCTCAGAGTGCTGCCATGGAGGAGGGACATGCCTGGAGAaagaGAAGTCAGCGTATGAATATACTAGGAAGCCCCAGCCCATTACACCCCTCATCATTAAGCGGAGTTATCCACAGAACTCAGCTGTGGTTTCACGGTCGTATTTCACGGGAGGAGTCCCACAAGATGATCCATCAGCAGGGAAGAGTGGATGGAATGTTTCTCTTGAGGGACAGCCAGAGCAATCCTAAGGCATTTGTGCTTACAATGTGTCACCACCAGAAAATCAAACATTTCCAGATTTTACCGTGTGAAGAAGACGGTCAAATGTTCCTGAGCCTCGACGATGGCGCCACCAAATTCACGGACCTGATCCAGTTGGTGGAGTTTTACACGCTAAACAGAGGAGTTCTGCCTTGCAAACTTAAACACCCCTGCACCACTGTGGCCTTATGACCTCCATTTGCCTGATTCCGCCTAAAGACAAACACTCAGACGCCGTGTGCTGTGGTGTAATGCTGTGCTGCTGGGACGGAGAAAAGCACACCGCGAGAGCAACTCTCTATCAACGAGAGAGGAAATCAAAAAGAACAGGCACGTACAGGACCagcaagaaataaagaaaaagcttGGAAATAAAGCTTGTGTGCTAGCTGCTGAAGAACCTCTCAGCCACCTGCACACTCGACCGTGGCCAGAGCAGGTTCTCAGGACAATCATCCAGAGGGAGTCTTCAGGATCCGCGGTCTTAATCGTGCAGATAATGGTTTGGGAAGACCAGCAGAACACTCGTAAATcgcatttgatttcattttgcaCTCATAAACCAGGAAAAACCAAGCTATGGAAATTGTTGCTTTCATAAATCAAGCAGATTTGATTCGAGAATGTTCTGTGAGATGCGGGCAGCCGTTTGGTGGTTTCAGTACTGTGAAAAGACATTGCCGTTCATTTCGTGCTTTCTATCGTTTTCGCCCGGTTAATCACTAGAATATTTAGacatttgctttctttttatttgctcataGTGTTGAGCAAAGAACTCTCGTGCATGATGcatttggcctttttttttctccatgttaAACCCTTTTCCCCTTCGCAAAACATAACCTGCAGCACTCTCTACTGGCCATAACGAGAATTAATGCGTCCCTTCACTCCTTTAAGGAATAGTTGGTCTCAAAAATGAAATTGGGTTATTTACTCACCTTATTGTTCTACAAAAacctttcttcttctcctttttttgtAGTGCACAGAAAAAGATAAATCTCCACACAACTGTATTTTGTAATTCATAGAGGCCATGGCTTTTAGTTTCCAGGACGAAAAGCACGACTTATATGACTCATCGCTATATTTCAAGTCATACGACGGTATTGTATTCGAGACCACAAGAATGTTGAGTCCGAGTCCAAGTGTTCCAGTGTGCATGACAACTCAAGAGTCTAGTCTTGAGTACAAAAACACTGCCACACGATAGCTTTGTTTGAGGAACCATCTAAAATTTTAAAGTCAAGCCAAATTTAAGACCAGCTTATATCTGattttggaaagacatgaaggTGAAAAATGATGGCTAAATTtagtttttgagtgaactattcctttaaacatgAGTTTAAGAACATGGCCTGACATGACCGCCACATCCTTTTTGGAACGGTGCCTTGATTTTAAAGAGGAGTCTGTTGAGAAATAACCACTAAACCCTCTGCTGGGAACTCCGCTGTGGGTCGCAGTCTACCAGGAGCTAGATCAACAAACTGGAATCTTTAGAACTGCTGTCATCTTTAGTCCCAGCTCcagtctgtttttgttgttgactTTCTAGTTTTCTCTCCACGTTTCAAAAGATTGTTTCGAGGACAGCACACTGTGAAGCTCGGGCTAAGAACACCCACAGAAAGATGGGGTTCGAATTTATAATCTGCCTTGTCCATGGTAGCAGTAGGTACAACGGATTTgtaaagatacttttttttgtacttgtgACGCAATGTAAAGAAAGAGCCATGTTTTTAGTTTGTACCTATATTGTATTAAACTAGATAGAGAGGGCATAGCCACCACGTCTACAAGTTCACCCAAGACACCAGTGCAAATGACGCaatcgtttttttaattattgcttcaacaaatttatttatttatctggaTTTGATTACTtgaaatttagtttagttttttcgCAGCGCTGTTCAATAATATTCTtccacatttttatgtattttttggacCTCGGTTATTAACTACACCCCGTTTCTTGAATCTTTTAGCGCTAATTCTTCATCAACGTCCTATTATAGTACACCGTCTTTATGGCCTGTATTAATGGTAGAGCCTGTAGAGCCTGTTCAGTGGGTGGTAATGTTGTGTACGTTACTGTCCATTGCTAACCTGACACGCTGCAAAACAATGcttttccagccaaaatatctaaaaaaatcttaaatcaagCAAAAATGATTGTCTTGTTTAAgcaaataatctgccaatggagttgaaaagttttttttttgcagtgtgcactatattgaaaaatattccAGTGGACAAAAACACAAGCTAGCACACGATATGGTGCAGCCCATTGAACAGACATGTATTCCAGACAGCTTTGTTTCCATTTACGTTAGATGAACTATGGTGTCTACGCAATCAAGAACTATTAGCAAATTTCATATTGTTGTCTATAAAAAATAGTAGTCACAAAGTAACATTAGGCTGTTCATTCAGATGCATTCTAAGATAAGGGATGAGGTACAGTGAGCCAGTTTtcgcaaaaaataaaataaaatcttgaaagGGCAATCCTGTATTTTGACCGTACATTATGCTGCTTATTACATGGCtacttacaaataaaaaagtaaataaaacaagaaatattgATTTATGTGATTATGTGACAAGTGATAAAGTATCTCAGAGAGCCATGTAATAAGGATATGATCTCAGTCAGTCAGGTAGTACTTAGACCTCATTGGATGATTTAACCACAGAAATAGGCCGCAGGGCTTAAGTCAGCGCTATTATTATTCACTTGAATATCTTTCTCAGTGTCAGTTAAGTTAATTCAAGCCTTGAGGACGAGTGTATGTCAGCGTTGATTTAGCTGCAGTTTGGGTGGGTCGTACGTTCACCAAAAGACACAAGCATACACACGCAAGCTTTCTGAACttgacattattgtctttatttttttcagggttTGATAAGTGAAGCTATACAATCAGCCAGCCAAGGACTAAACCAACAACATTTCAGCTATGATGCTATTCATTAGCATATTCTGTAACCAGTTTCCGTATACTACAATACCAGTGTAACAGCGTATCAGGAATATTTTCACCTGGTTCAGACAGATGGATGTATTGAGTTTAGAGGTTATCGATTTTTTCCTGGAAtcatttaacaataaaaaaaagaacgatttttttttttttttttttgtattttgccaGTGAGGAAGTTGTAGGATTCTTAAAGGCTAGTTTACTATATGTTACTGGTGAATCACCTGTGTGAGTAAAATTGATCTGTAGGATAGTCTGAGCACCATTAGCGCTTAACCTACTTGTTAACTAGTTGGCCGTTCAGTATAAAAGTGAGTGTGAGCAGGATTTTTGTTCGCAGACACTCTGGGAgttaatacagtaaaacacacgcatttatttcttttgcaaCATCGTTTCGTTTTCACATATATCATGTAACATGCAGCTCAACGGGACACTATAGTTACAATCCATTCATGTACAAATGTTCAAGTTTGTAGATACCACACTGAATTTTTggatacagattttttttttccacaatggcatataaaatgaagaaacttgacttattttagtgcatttttattatttggttaAGTGTGTAAATATGGAATCTATTCTATTTTGTGTTGCTTTGTCAAGCTAATTGACCTTAAAGAATATGTTATGTTTGCATTGAGCTGACGGAAAACTGGACTTTGAACTCCTTTAGTCATTGAAGGTCATTATTAAGCTAGTTTTAAAAACTCATTATTCTTACAAATACACTTATTATGAAAACGCTAACCGATTTTTGCCTTGTAGATAttgtagaaatgtttctttaatacgaatcaaagacaaatgtttttttttttttggattttccCCATTGCTGTTTGAAAGAAGCTGGTGGCAGCATCTGCGAAATGTGTAATCTGTTGAGAGTTTATCggtgaaagaaataaatgtcatttttatatttaaaagaaatgaatgtaACTGGGTTGCTCAGGGTTGAAGTGGAGGCTGTTTAAAACTGGTCCTGTGGACCGGCAAGACTTCttctctgtatttttctttttattaaactaaCATTGTACTTCTTTTTATTGAGTCTTTGACCACACCAGACCTCTAttatttcccccttttttttctctaaatgaATCTCTGGCCTTCGATATATGCTAGTTTTGTCAGCAACATCTGTATCATATAGCTTCCACcctttcttaaagggacagttcacctaaaaataatcATCATTCGCTTACCCTCAAGTAGACGCGTTTTTTTGCCCGTGCAGCGAAACAGAGCAGCTTGAACGTTCTGCTATATCACTCCTTTTTTACtccatatacatttttttggatgaactattcctttctgCATATCAGGTGCCTCGAAACCCTACGGTCCACCCTCTCTCTTCACTAATGTCGGCTTGAGAGGGTGTTCCTACTCAGGTTATGGTTACTGATCTCGAATTCGTGACCATTTGTCACTAGCATCAGTTCTGATGAAAGAGGAGGTCGTGCTTTTGATTACACTGTTCATGTTACATAGTAATTGCGTTATGCATATTGCAATGATCTTAATGTGTAATTATGTGGATCTGCTTTTAATTACTGCTATCGTCTTGAACCACAACAACACCTAATGCGTGTAACATGGACGCTGTAATGTAAAGCAATACTTCTGTGACTTTTTTCATGCCATAATCAGTACCTTCTCCCAACTGTCAGTAATATTTCCTGAGCTTTgcgcatgtttgtttttgtttttttttcgatGCAAAACAATACCATGACCATAAATGTAAGTAATATAGAGGTAAATATGAATCTATGTCTTTCAgggaatgaaacaaacaaacaaacaaacaaaaagatggatagaaaaaaaaggtttcttctTTTCAGATTCTGTATTGATAATGTGTTCTGCTTGGTTCTGTAAATAGCTGAATGGCTTACAAATTCTAATTGTAACCTTTTCAGgtatttttgtacaaataagGGACTGATATATTCTGtttagaataaaaattaattgattgCTATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164074 lncRNA downstream 44370 9889071 ~ 9902981 (-) False gask1a
TU164073 lncRNA downstream 59122 9879635 ~ 9888229 (-) False gask1a
TU164072 lncRNA downstream 71687 9875392 ~ 9875664 (-) True G111097
TU164002 lncRNA downstream 192371 9754315 ~ 9754980 (-) True G111048
TU163998 lncRNA downstream 270846 9674864 ~ 9676505 (-) True G111045
TU164327 lncRNA upstream 719418 10730168 ~ 10730415 (-) True G111298
TU164374 lncRNA upstream 780814 10791564 ~ 10793616 (-) True G111329
XR_006252847.1 lncRNA upstream 913365 10924115 ~ 10924764 (-) True LOC122361039
TU164468 lncRNA upstream 1149089 11159839 ~ 11160056 (-) True G111393
TU164502 lncRNA upstream 1214436 11225186 ~ 11225409 (-) True G111420
XM_043260001.1 mRNA downstream 1745 9929336 ~ 9945606 (-) True ddc
XM_043261427.1 mRNA downstream 33009 9904473 ~ 9914342 (-) True entpd3
XM_043261423.1 mRNA downstream 44537 9877211 ~ 9902814 (-) True gask1a
XM_043261431.1 mRNA downstream 88720 9818586 ~ 9858631 (-) False snrka
XM_043261430.1 mRNA downstream 89327 9818586 ~ 9858024 (-) True snrka
XM_043260850.1 mRNA upstream 4189 10014939 ~ 10054825 (-) True cobl
XM_043261624.1 mRNA upstream 88813 10099563 ~ 10194294 (-) True triob
XM_043261970.1 mRNA upstream 276336 10287086 ~ 10354596 (-) True adcy2a
XM_043261954.1 mRNA upstream 353671 10364421 ~ 10372271 (-) True LOC122361022
XM_043261951.1 mRNA upstream 361661 10372411 ~ 10386594 (-) True ice1
TU163906 other downstream 674746 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 795168 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 1299796 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 1311129 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 1630666 8312265 ~ 8316685 (-) True G110556
TU164366 other upstream 736043 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 851201 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 851201 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 1259914 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 1399928 11410678 ~ 11411777 (-) True G111490

Expression Profile