RNA id: XM_043260679.1



Basic Information


Item Value
RNA id XM_043260679.1
length 972
RNA type mRNA
GC content 0.45
exon number 7
gene id dctn3
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5571501 ~ 5573800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gaagaagacgactCTGCGAGGCGTCACTTCCGGTTTAGAGAAGAGCCACCGGACGACAAAATGGAAGGAAAAAACAATGTAGATGACCTGGACGCTCGCCTTCAACTTCTCGAACAACGCGTTTACGGCGAAAGAGCTGGAAAAACCAATAAGCCAGTGAAGTGTGCCGAATCCCTCACGAGGATCAGTGCTGCCCTGGCAAACACGGCCAACAAAAGAGAGCGAGTCAAGATCCTCCACAAGAAGATTGAAGATTTGCTGAAGTACTTGGACCCCCAGTTCACAGACTTCATTGCCGTGCCGGATGCAATGAAACTAGAGTTTATTCTAGCAGAGGAAGAGTTTTTGCGATCTCAAGCCACATTATTGGAGCAGGTCCACGATCTGCAGCCTCTTCTGGACAGCAACCACATAAAAGCGGTTCCAGAGCTGACCACCAAAGTGCAGCGGTTGTCACAAATCCACATTCAACAGCAGGACCAGAATGAAGAACTATCTGCTGAAGTGAAGAAGCTGTTTGAAGAATACAACAAAATGATGTTTCTTTTATCGAAACAGTTCTCCCAGTGGGACGAAACCCTCCGGAAGCTGGAAGGACCCAAGCAAGGCCAGCAGACGGACTAGGACGCTCGTTCTTCGCACGCTTCACTAAATCAGCTTCACTGTCGTTCCTAAACGTAGCTTGTTTATAAGTGAGTGTTGTCTCCGTCTACACTTTGAGTCATTATGTACCGATACGGTCAACTTACTgtattataagtaataatatgcTCATTACACTTgagtttacaaaaacatttctctgcTTGGAAAGCGTATTGCAACCTTTCTCCTCTACGTAAactcattttgctttttaatttatttattccgACAATTGTGAGGAATGCTGTGCGTATAAggcggggtttttttttaccgcCTTTAGAAAAGTTTCACTACtaatcataaataaaagaaGGTGCCACTGTA

Function


GO: NA

KEGG:

id description
K10425 DCTN3; dynactin 3

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU162464 lncRNA downstream 134434 5435832 ~ 5437067 (-) True G109944
TU162484 lncRNA downstream 173984 5397297 ~ 5397517 (-) True G109956
TU162481 lncRNA downstream 175147 5396130 ~ 5396354 (-) True G109953
TU162462 lncRNA downstream 223942 5346405 ~ 5347559 (-) True G109942
TU162416 lncRNA downstream 250205 5247238 ~ 5321296 (-) True G109914
TU162539 lncRNA upstream 1840 5575640 ~ 5581732 (-) True LOC122360242
XR_006252793.1 lncRNA upstream 3188 5576988 ~ 5578651 (-) False LOC122360242
TU162540 lncRNA upstream 5119 5578919 ~ 5581732 (-) False LOC122360242
TU162541 lncRNA upstream 5119 5578919 ~ 5581732 (-) False LOC122360242
TU162673 lncRNA upstream 201047 5774847 ~ 5777041 (-) True G110090
XM_043260675.1 mRNA downstream 719 5560481 ~ 5570782 (-) False ttk
XM_043260674.1 mRNA downstream 719 5560481 ~ 5570782 (-) True ttk
XM_043260677.1 mRNA downstream 11605 5508617 ~ 5559896 (-) True bckdhb
XM_043261998.1 mRNA downstream 150861 5418473 ~ 5420640 (-) True tpbgb
XM_043260026.1 mRNA downstream 191539 5367332 ~ 5379962 (-) True rpa2
XM_043260424.1 mRNA upstream 208867 5782667 ~ 5790534 (-) False si:dkey-283b15.2
XM_043260423.1 mRNA upstream 208867 5782667 ~ 5789002 (-) True si:dkey-283b15.2
XM_043261652.1 mRNA upstream 243240 5817040 ~ 5818618 (-) True ndufa3
XM_043261179.1 mRNA upstream 247191 5820991 ~ 5822850 (-) True mrpl51
XM_043260635.1 mRNA upstream 260357 5834157 ~ 5850214 (-) False arnt
XR_006252935.1 other downstream 211822 5359510 ~ 5359679 (-) True LOC122361376
XR_006252797.1 other downstream 326040 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other downstream 326041 5235646 ~ 5245460 (-) False vegfaa
TU162095 other downstream 1475997 4094757 ~ 4095504 (-) True G109724
TU161934 other downstream 2441522 3128061 ~ 3129979 (-) True G109600
TU162692 other upstream 243264 5817064 ~ 5818362 (-) False ndufa3
TU162864 other upstream 370421 5944221 ~ 5948789 (-) False LOC122359839
TU162885 other upstream 455408 6029208 ~ 6034777 (-) True G110208
TU162893 other upstream 522875 6096675 ~ 6099927 (-) True G110215
TU163014 other upstream 1508162 7081962 ~ 7083524 (-) True G110303

Expression Profile