RNA id: XM_043260914.1


Basic Information

Item Value
RNA id XM_043260914.1
length 1530
RNA type mRNA
GC content 0.38
exon number 6
gene id prelid3a
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15959669 ~ 15963708 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TATTGGTAGCTGCTTTTCTAACAGGGAGGTTCCGCTGCACTTGATTAGATGAGGAGCATCTCGAAGCCGGTATGATGGAAGCAGAGCGAGAAAATACGAATGCATGAGATTTACAGTCCACCGTCGTTTGGAGGCACTTTCTAACTGTCGCAAAAATGAAGATTTGGAGCACCGAGCACATATTCAGCTACCCTTGGGAGACCGTGATCAAAGCGGCTATGAGGAAGTATCCTAATCCGATGAACCCTAGTGTCGTCGGGGTGGACGTTCTTGACAGGAACTTGGACACAAATGGACGTCTTCACAGTCATCGGCTGCTCAGCACGGAGTGGGGGCTTCCAGCAGTCGTCAGAGCGattttagggACAAATCGGACCGTCACATATGTAAAAGAGCATTCCATTGTGGacccagaagagaaaaaaatggagCTTTGCTCAACGAACATAACCCTAACTAATTTAATATCAGTTGATGAAAGGCTTGTCTACAGGCCCCATCCAGAAAATCCAGAGGTCACTGTATTAACCCAAGAGGCGATCATCACCGTGAAGGGGGTCAGTCTGAGCAGCTATCTTGAGGGACTGATGGCTCTAACCATGTCAGCTAATGCAAGAAAGAGCCCATGAGTAAGCAGCAGCACCAGCTCTAAAACCACATCTGGCCTGCGTGACTTTGGCCCGTCTCTCTGTGTGTTGATGTCTGTATTGGAAGGTAGTCAAATTAGTGCTCCTTGATGCACTGTTGGATTTAAGACCTCATAAAATTGCACTATTACAGACAAAACTGTATAGAGTTTTGAATGTCGCTACAAAACATGTATGCACTGCACTGACTACCTCttattttagatttcttttaatGCTATAACAGGGATCCCAGTATCAGTCGGTTGTTAATTCGGAAATTAAGCACATTAAAGTTCAGAATATCtggaaatgtaatatttttggtgcatccttaatttttttaaagacatgaTTAACAGGAAGTTGATTTGGTTGTTTGCATGGATAGTCATAAAGTGTAATTAACTaataaagtctaaataaaacttGTAGAATAGATACTATAACTTatgaaaagttattttgtaataacattctatatattctataattTAAACAAGTTTATGTTGCTTCTTTACACAATGTGAACATATTATCAATTCATTTGTAAaggctgtttattttatttagtagaATGATATGATTGAATGCTTATTTAtggttatgtaaaaaaaaatcttatttcattaaattttatTCTTATAATATTGCTGTGGTTCAGTACGAAAAGCATGTTCGCGTTATTATGTGGGAAAAATGTCACAATACACGTTTTCCTTTTCAGTTCAGTGTATCATCTTTGACAAACTTGTGTTGCATttgtaaactgttttttatttaaaatcattgcttgtcaaaatctaaacaaataatTGTTAAGGTCTTATGGAGCCCCCTACTGgcgatttttaaaagaaaagacattttgaaaaaatattaaactgagTTTGAAAAGCTGAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU167209 lncRNA downstream 1005 15929222 ~ 15958664 (-) False G113234
TU167212 lncRNA downstream 1005 15939895 ~ 15958664 (-) False G113234
TU167208 lncRNA downstream 1005 15951428 ~ 15958664 (-) True G113234
TU167211 lncRNA downstream 1005 15951428 ~ 15958664 (-) False G113234
TU167207 lncRNA downstream 1005 15955495 ~ 15958664 (-) False G113234
TU167227 lncRNA upstream 1050 15964758 ~ 15967193 (-) True G113244
XR_006252813.1 lncRNA upstream 21033 15984741 ~ 15986184 (-) True LOC122360541
TU167258 lncRNA upstream 41150 16004858 ~ 16006374 (-) False adnp2a
XR_006252851.1 lncRNA upstream 102458 16066166 ~ 16067545 (-) True LOC122361072
TU167287 lncRNA upstream 156618 16120326 ~ 16196677 (-) True G113281
XM_043260718.1 mRNA downstream 20779 15936647 ~ 15938890 (-) True lratd2b
XM_043260373.1 mRNA downstream 90458 15867304 ~ 15869211 (-) True prss1
XM_043260368.1 mRNA downstream 154967 15799086 ~ 15804702 (-) True has1
XM_043260584.1 mRNA downstream 200002 15754181 ~ 15759667 (-) True si:dkey-79d12.5
XM_043260583.1 mRNA downstream 205759 15735273 ~ 15753910 (-) False kcnn4
XM_043261263.1 mRNA upstream 34604 15998312 ~ 16000648 (-) True rbfa
XM_043260048.1 mRNA upstream 37605 16001313 ~ 16006471 (-) True adnp2a
XM_043261540.1 mRNA upstream 106831 16070539 ~ 16103655 (-) True LOC122360718
XM_043262054.1 mRNA upstream 185255 16148963 ~ 16152079 (-) True LOC122361095
XM_043262055.1 mRNA upstream 188796 16152504 ~ 16154388 (-) True LOC122361096
TU167180 other downstream 97776 15857599 ~ 15861893 (-) True G113220
TU167155 other downstream 140583 15816979 ~ 15819086 (-) True G113203
TU167050 other downstream 463294 15468480 ~ 15496375 (-) False rps19
TU167269 other upstream 49256 16012964 ~ 16013751 (-) True G113275
TU167253 other upstream 175611 16139319 ~ 16141235 (-) True G113267
XR_006252800.1 other upstream 254953 16218661 ~ 16228466 (-) False atxn1b
XR_006252795.1 other upstream 269264 16232972 ~ 16239506 (-) False fam8a1b
TU167506 other upstream 716489 16680197 ~ 16682178 (-) False esrp1

Expression Profile