RNA id: XM_043260930.1


Basic Information

Item Value
RNA id XM_043260930.1
length 1756
RNA type mRNA
GC content 0.46
exon number 3
gene id LOC122360378
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 27685267 ~ 27690120 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACGCGGCGATTTCGTTGCTCTGCGCGCTGTAGTTTCAGTTTTTGCTCACGAAAAGTTTTGGGCGTTTCTCTTCACAGCGCTGGGTCTGTCCGCCTGTGACATTTTCTCCAGACGTCGATGTGTTTTAAACACGAcAAGCCCACCCTGACTCGCACTGACCATTTAGAAGTTGAGGGGAAACAAGGACTAATACATatacattttttgcttttgaaactgAAAGATGGCCGATCAGCTGCAGAAActtgtttcacagaagaaggATGTCGTCGAGACCGTCATGGAAGTGTTTGAGCAGGACGCAGAAGTGGTGGCCAGCATCGCTGGAGATCTGTTCCCCGTGTTCTCCATCGCAGCTCCGATCGTGAAGCTGGCGCTGGATAACGTGGAAAGCAAAGAGGCCGAGTACATGAAGGAGCAGTTCCAGAAAGTGCGAGATCGCCTGGAAGTCGTTTCTGAAGAAGTCCAGCAGATAAACCAGGAGATCAAGAAGAGCGGCATAGATGCAACCTACTTCTCCGTGGAGGAGAACCTGACCAACCAATTCCGCAAATTCATGGACGTCCTGAACGCCAAACCTAAATTCAGAGAAGTCCGCAAGAAAACTTTCCTGGACCACTTCAACAGGACAGGGGGTGATAAAAACCTGCACACACTTTATAACGCCGTAACTGGAGATAACTTCTCAGGAGAGTCTGTGCTGGAAATCACTCTGAATTACGAGCAGAAGAGCCGCAGAATGGTGGAGGATTTTTGCGCTACGCTCAAGAAACTGTTCTGCATCGGTTTGATCGCCTTACTGGGACAAGCAGCATTGAAAGGCGATGACGAGGAGGAGAAGCTGCTTCAAGATTGGAGCGAAAGGATGAAAGTGGTGCAGGATAAAATGAACGTCGTGATTGAAGACTGCATCAACAGCTTTCCGACGCAGGCCGAGCTGGACACCAAACGCATAGTGAGAGACCAAAGCGACAAAAGCAACCAGCAACTGGCCGACTTGCTGGTAGAGCACCTGAAAAAGAAGTACGACTGGGTTTGCTGGTCAGTCCGCGTCTTTAACTCCCCCACCGGCCTGTTCACCAACAAGAAAGACTTCCACGGTTTGACGGGAAAGAGTCGCTTTCAGGTGCCATCGTCAGATGACAAGCTAAACGTTGTGGTCTCCTACAGCGCCTCGCCTGAACCCATCGATAAAGCCCGGATACAGAGCCTGATTTCAGAGCAGAAGAAGGTGACGATGACGCCGTTGGCTGAACTGCTTTTTGAGACTATCCCTGTTAGTGTGGTTCACACAATCAAGACCTCATGCAAAGATCTGGGCTTCTCCAGCAGCTTCTCTGAAGAGCTGCACTTCTTTGAGGAGTTCAAGAGCTTCTGTGTCTTTCTTCATTCTGCTTAAATGAAGAGGAGAAGGTAAAGATTGAGCAGATGTTGTAGAATGATATTCAATTCGACAATTATATTTAGACAACTTAGTCCCTGACTTGTGACCAAAATATTGTTCtctccattttttcttttttcatcttttatacTTAGTATTTCCTTTATCTCTGCTTGTTTTAAAGCTGCAAATGAACACTTTAATATATcgaatttgtatttgtaatataaaaagtgtttagTTCTCTCTTATTAGTGCATTTGGGGGGTGATGGTAGGGATTTTAAGATTAGGCTGGTAAAAATGTAGTCTCGTTGGCACTGATATGGTATGATGTGGGTAGCGCTGACATACAGCACCATTGTGCTTTGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU172604 lncRNA downstream 8008 27675988 ~ 27677259 (-) True G116833
TU172603 lncRNA downstream 8408 27675988 ~ 27676859 (-) False G116833
TU172570 lncRNA downstream 72767 27612068 ~ 27612500 (-) True G116814
TU172568 lncRNA downstream 76302 27608212 ~ 27608965 (-) True G116812
TU172536 lncRNA downstream 93246 27586903 ~ 27592021 (-) False LOC122360078
TU172605 lncRNA upstream 11202 27701126 ~ 27704934 (-) True G116834
TU172606 lncRNA upstream 16682 27706606 ~ 27707458 (-) True G116835
TU172656 lncRNA upstream 262644 27952568 ~ 27954707 (-) True G116865
TU172658 lncRNA upstream 270707 27960631 ~ 27961680 (-) True G116867
XM_043261566.1 mRNA downstream 47736 27631766 ~ 27637531 (-) True LOC122360733
XM_043260268.1 mRNA downstream 54993 27628557 ~ 27630274 (-) True LOC122359999
XM_043260097.1 mRNA downstream 57751 27622629 ~ 27627516 (-) True LOC122359885
XM_043261498.1 mRNA downstream 63636 27613773 ~ 27621631 (-) True LOC122360683
XM_043260399.1 mRNA downstream 126295 27538393 ~ 27558972 (-) True LOC122360076
XM_043260926.1 mRNA upstream 516 27690440 ~ 27693938 (-) False LOC122360376
XM_043260928.1 mRNA upstream 516 27690440 ~ 27693840 (-) False LOC122360376
XM_043260927.1 mRNA upstream 516 27690440 ~ 27693670 (-) True LOC122360376
XM_043261497.1 mRNA upstream 206804 27896728 ~ 27900760 (-) True tmem176l.4
XM_043261496.1 mRNA upstream 206804 27896728 ~ 27900757 (-) False tmem176l.4
TU172557 other downstream 57607 27623427 ~ 27627660 (-) False LOC122359885
TU172389 other downstream 105403 27520190 ~ 27579864 (-) True LOC122360079
TU172454 other downstream 324438 27358707 ~ 27360829 (-) True G116745
TU172373 other downstream 686908 26994167 ~ 26998359 (-) False LOC122360878
TU172354 other downstream 729433 26954220 ~ 26955834 (-) True G116677
TU172608 other upstream 17792 27707716 ~ 27727944 (-) False G116836
TU172609 other upstream 102780 27792704 ~ 27804770 (-) True G116836
TU172659 other upstream 273564 27963488 ~ 27964958 (-) True G116868

Expression Profile