RNA id: XM_043260951.1


Basic Information

Item Value
RNA id XM_043260951.1
length 6245
RNA type mRNA
GC content 0.45
exon number 9
gene id nacad
representative False

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 17010376 ~ 17022578 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCAGATTGGGGCGGGCTCTCTCGTAATCAGAGAGAATACTGCAGCTCACGCTCAGATTTCCCATGCTGTTACCGGCGTGGCTCTGCAGcccttctctctccctctctctctctctctctctctcgctctctttctctctttctcacatgCACGCTGACATAAATGCACACGCAGTGAACACGGATCTGTATCTCTGCGCTGAGGAGGCAACATCCTATATTGGTTTTCTCTGTCCTCAGTTTACTGGCTCCTGTTTTTTAGGCAGTGCGTCAGAGGCTGTGCCACACAGATATGCCCGGTGAGACTGAACATCGGAGCGGCCCCACGCAGGGCCTTCTGGACTCTGGAGACCCACAATCAGAGCTGCCAGGACCAGatcTGTCTGGTCAAACATCCAGCTCTTCAGCCTCAACTCCAACAGACAGTGCCTCCAGTCCTTCTCCAAGCAGCCCTCCAAAACTCTCCCCACTATGTACTCCTTTTGGACCCCGTCTGGTAATGGCCAAACCAACCACTTCTCCTCGACCACAGCCTGAGGGTGCAAGTTTTGAATTAGAAGGCCATTCTGGAAATATCGGCCGACCAACTGGGCGGTTTGGTAGAGCAGCCTGCAGACGAGGTCCTATGAAAATGGAACGGATCAAAGTCCTAACTGGATCAGAAATAGAAAGTGACTTTCAAGAGCCAGAGACCATGGACTCAAGGGTGGTAATGGGACAAGAGGCACTGCTAAGAAACATGGAGACACAAAGTGGAGTGCTGCTGGGAAAGCAGATAAGTAAAGAAACATCGAGTTCAGGACATCAGCCTTCAGAGCCTTCCATGAAATGTCATATTGGTCTAGATGAAAACGCAAAACTAGACACTGGTCAGCTGAGTTCTACTGTAGATCAGGCTAAGACTTCGACTTCATTTCCAGAACAAGACAAATGCAAAAGTCAGATACTTGACTGTCAAGTCCTAGAGTCCAAAGTGAGAGATGCCGAATTGACAGACAGCAGTACTCTTTTCCCAGAAAATGAGGGAGAGCCACTGTCTTTATCTCAGGGTGAAGTGCCTTCCTTGTCATTTTCTGAGCCTCCCTATGTTGTTGACCCACAACGCATTGGTGTCCTTCCAGGACTGGATCCTGATCGCTACTACACAGCCCCTTCCACCCCCATTAAGATGGCTTACTGCTCACATCTCAAGCAACAATGGCGTCCCGGGAGCCCGAGCCAAAGTCCAGGTTCCCCAACTGATGAGTCTGATCTGTGCTCCCCTCCTACCTCTCCCTCTGGTTCCTACATGACTGCTGAGGGAGGCAGCTGGACTTCATACACCTCTAGCACCTCCCACTCATGCTCTCCAAACTTAACAGCTGAGGCAGAATTGCAAGAAGCTCCTGCTTGCTATGTGGGGTCTCTCTCAGAAATTGGCGACGAGCTTGGAGATGATCGAACTGGTAACGAGAGAGATGCTTGTCTGAGTAAACATGATTTGCCAGAGTTGCTAGAAGATGTGGCCTGTGAAGTGGATATGCTAACAAGGGACACCTGTAGTCCTCATTGGGTGACAGAACGTGATTCCacacaagaaagaaacaggaGAAGAACAGACTGCCAGGAGGACATAGGGGGGTCTGAGGGCTCTCTGAATCCTAGCGATTTCCAGGGAGCCCCTGATGCAACTCAAGCATTTAGTGATCCACATCAAAGTCTTGAAATGGATTTTAATACCTGTTTCTCTGAGtcatctgtgagcctggatcaCTCTCTAACACCAGACAATAATGCAGCTGAGGTACTGGATACAGAGAGCAAAACCCCTGTCTCCCACTCTCCAGAGACTGTAGGCATAGAAAGTAATAGCAGCAATAGTTTATATCTTGAAATAGGTTCCTCTGCTCCTGTGTTCCATGGATATTCTAGAGAGGATAGGCTTGGGAGTGATGCAATGATTCCGGCTTCTATGCTGCCATTCCATGGAAGCTTAATATTCCAGGCAGATTCCATGGATATAACCCTATTCCCCACTGATGATGAGCAGGGCAATGATGTGGACGCATATGCTGCTGGAGAGGAGGAAGCTGATGTAGATGAgtatgatgatgaggatgatgaagatgagtgTGATGATGAGGATGTGGATAATGACGAGGCAGAGAAACAAGAGGCAGCTTGGAGGGTTGGAAGGGAAGTGGAAGACCCAAATGAGGATGACACCTCTGCATCTTTCCTAAATTCCCTTTCAGAGAACTCAATAAATGAGGGTGTAGATGAGTCCTTTGCTTATCAGGATGACACTGAGGATTCAATTGATTCCACGTCTTATAACGGGGAAGAAGATGACCATCTGTATTGCACTGAGAAGCATGCTGAACTCTCCCAACAGTTCCCTGGGCCAGATGAACCCGTGCAGTCAGTAAGCCATGCTAAACCTGAATCTTCAGGCAGTGAGAGTGAAATGGAGATATCCTCTGGATCATCTGAGCTTCCACGTGTAGAACTGCAAGGGAATCTGGTAGACTGCAGTGTTTGTGGTGAAGGTGTAATTGCACAACAGATTTTAGAAACAACGTTGCTGAAAGGTGAATCTTCAAAAGAATCAGCATCAGAGATCAAAACAATTGATGAGGAAGGCAAGCAGAGTACAGATCCCTCAACGGTCATGGTAACTTCAGAGAAAGGACAGCAGATTGCCACAGATGATCCAACACTATCTATTGATCAAGACAAAATAGAACAATATAATAGCCCCGTTGATTCCTGCATGACAGGTGCTACAGCTGCTGATATGTGCTTTGAGACTAACGTAGATTATAGCCAGGAACTGGATCAGAAAAATGGAAATAGTATGGAATTGGACACATCATTGCAGTTAGCAGAAACTGCAACCAATGACCTAAATAAAGGAGTCCCCCAACTGACATACCTGGATGACTGCAGCCCCACAAACATTCCAGTTTGTGCTTATCCTGAACTGTGTGAAGTGCCAGAAAACCTAACATCAACTGATGTTTTACCATTTGAACGTTCCATGAATCAAGATAATTTGACAGAGAATCAACCTGGCAATGATGATGTAAACCATAGCTCTCAAAATATGTCCTGCTCCACATATAGCAGACTTgtcatttcaccaaaaaaagagAACTCAGAGAGCAGTATGACAGAAAGTGAACTTTACCCTGATAGTTGGACACCAAGGGATCCCTTGTCTTTAGGTGAATGCTGTGACTTTGAGGCTGAAAATCTGCTCATGTGTGAGATAACTAGATCAGTGCACAGTAAAGGTTTGCCGGTCACTCATAACATTGCAACTGGAGAAGACATGATCGGTGATGATGAGGACAACAACCGATATTGTGACCTCCAAGAGAAAATGGCAGACATTGATGTTGGTGTGGTTGAGTCAAACATTGCCAGCTGGAGATCGATTCAAGATCTTTCAGAGGCAGGAGGGGGCGAGGATGATGCCAATAACCTTCAAAATCCAGAGAGCAATCCACTTATACACTGCAGTTCTGATAAGGGTCTGGTGCCATCATGGAATGATCCAGAAAAAACGTGCGCACCTTTAATCCTGAGTGCTCCATCAGACCTTACATTAAATATGCTTTCAGATGATGGGAAAGATGGGAAAGATCAAACTCCAAATACAGACTTCAACATTCCCAAGGATTTTTCTTCAGACACATTAAAGAAGGAAAGTGATGAAAGAACGTCTGGACAGTCTCATAATCTGGAATCTTGTCAAGAACCTGATAATGCCATGTTAACAGCAACCATCTCCCCAGAACACATTGATCTTTGTGGATCTTCTACAAAAACTAACCAAGCAGATAATCTTGGTCCAGTTTTAAATCAGGGTCATTCAAATTCTCAACAGTTTACCTTAACAAACATTGATTCTGCCTCGGAAAACAAGCTCACATTCAACTTGCAAGGAGGATCGTTTGGCACCTTCACATTTAGAAAGAAACCAACTGATATAAAGATGGTTGACTCCGGAGAATTAACAATTCTCCAACAGATTTCTGTCTCACAAAAAGAGACAAATTCCAATGATGGGTCTTCAAATGAGGTTGTGGGGAAGAAAGAAATTCACTTAAGAGCACACATCAAAAATGAAACGGTAACTAATGAAGCTAAAACCACTGACAGACAACTTAGTGAACAAGAGATTACAACTGATGCTCAGGATCATGAGATGGATAAACCAGACTTCCATGAAAAGAGAAACGAGGGATTGAAAACATGTCAAAAGAAAGAGGAACAAGATTTTATGGAGAACGTTTCATTTCTGGGGCAGAACAAAAGTCTTGATGATGATTTACATAAATCAGGTGTTTCCCAAGTTGACAGTGATGAGACAACACCAAAAAAAGAACAGATTGCTAATTCAGGTCATGACAAAAAACCAAAGGTAATTGATGCTCTTAAAACCAACATGGCAGATTTAGCCTCAACTGGCAATGAAAAGATCCAGTGCCAAGGAAAGGAAATGGAGACAACAGGTAATCAAGAGCCAAGTTTTGATAGATTTTCAACGAGAGAGGAATTTGGTGAAACTCAGCAGAAAGAGGATGCCTTTATAACAGAGAAAACTGAACTTCATCAAAGACCAGAACAATCAATTTTTAACTCCACTGACCCTAGCTATATTGATCCAAAAGAAGCTGTTCATACAGAGCCAGTGGTTGTAACAGACCTTACAAGACCAGATAGACAGAAGGAACTTCCAGACAGTTCTTTGAGCAGAGTAAGTTTGACAGAAAGCACAAGAGACATCAATGACAATCACATAGGGGGCAGTTCATCCCTCACAGTGCACAACTCAGAACAAGACAGGATCTCTTCAACATGTTCATCCACAGTTATCCAGGAGGAAGGTCTCTCTACCCCTGTTCAGGAGTCACAACCAATTCGTGACATCTCCCAAACATCTGCTGCCTTCTCACATACAGCTCAAGACAACAAACCCAGCCAACCTGACTATCAAAATCCCATTCAGACTTCTGGAATAACCAGTTTGGAATCAGCAGCAAGGGAAACAGAGGAACAAACACCAACTTTGGTTCCTATTCAAGACACATGTGATCTTGAAAGTGAAAGAACAGTCGTGGCAGCGAAACCATGTAGACATGAGAACCTTCCAgTATGCAAGGGACACCGAACAGAACCGTCCCAGTTCACAACATCTACTGGACAAAAGGACAGTAAACATACCCAAAGAATACTGAATCAGTCAGATGAAAGAGAAATGCTCCCCTGCATCAGTCCAAGACCAGACTTCATAAAATCAAAGCAAGCTGAGCGACAGAGCATAGAGCGAGACGTGTGCCCAATTAGCTACAGATCAAAAGGCCCAGAGGACTTGGATCTCCCCTTCAAAAACAATAGTTCAGGTATTGAAACAGACAGTGATGGCTCAGTACCTGAGCTAGAAGAACCCAGTGGGACATTGCTGAGACCCTCAAATCCACAGCTCTCACACTCTCCTGCTGATGAGTCAGTGAGCAGAGCCAAACAGAGTCGAAGTGAGAAAAAAGCACGAAAGGCGATGTCAAAACTCGGGCTGAAACAGATCCACGGGGTGACGCGCATCACCATTCGGAAGTCCAAGAATATTCTCTTTGTCATTACACGTCCAGATGTGTTCAAAAGCCCTGCTTCAGATATATACATAGTCTTTGGAGAGGCCAAGATTGAAGACCTATCACAACAGGTACACAAGGCAGCGGCAGAGAAATTTAAGGTTCCTCTTGACCCCTCACCTCTGCCGTCTGACATCACACCAAGCCTGACCATAAAAGAAGAGAgcgaggaagaagaggagCTGGATGAGGGTGGGCTGGAGCAGAGAGATATCGAATTGGTGATGGCACAGGCCAACGTGTCTCGAGCTAAAGCAGTTCGTGCACTGCGCCACAATAAGAACGACACTGTCAATGCCATTATGGAGCTGACCATGTAAAAGAGGAAAAGACTTCTACCCCGCCCCTTGCGTGTTTTCTTCCTATAAGTAATGCTGCTATATTGCACCGCCCAAACTCCTGCTGAAATAAATCTGTTACAACCAGAGCTGTTCGTTTCCCAACATTATCTACGAATCATATAAATGCAccttacaaacaaaaaaatgtatcgttatacattttgaacaaattttaatattgcCTTAATGGCTCAGATGGTAGATCAGAGGATTGTAGAAATAAATGCTCATGTCCTCAAAGCTGATGGCTTGAATCTGACCtgaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU167748 lncRNA downstream 17997 16991791 ~ 16992379 (-) True G113605
TU167747 lncRNA downstream 20398 16989710 ~ 16989978 (-) True G113604
TU167728 lncRNA downstream 96414 16913660 ~ 16913962 (-) True G113588
TU167727 lncRNA downstream 98494 16910335 ~ 16911882 (-) True G113587
TU167704 lncRNA downstream 114453 16894352 ~ 16895923 (-) True G113567
TU167764 lncRNA upstream 44945 17067523 ~ 17078008 (-) True G113617
TU167785 lncRNA upstream 164367 17186945 ~ 17187257 (-) True G113637
TU167838 lncRNA upstream 278751 17301329 ~ 17301558 (-) True G113672
TU168084 lncRNA upstream 612215 17634793 ~ 17670174 (-) False G113832
TU168083 lncRNA upstream 637838 17660416 ~ 17670174 (-) True G113832
XM_043260427.1 mRNA downstream 28966 16978772 ~ 16981410 (-) True rbm12ba
XM_043260426.1 mRNA downstream 41556 16951179 ~ 16968820 (-) False tex10
XM_043260425.1 mRNA downstream 41556 16951179 ~ 16968820 (-) True tex10
XM_043261046.1 mRNA downstream 81690 16915518 ~ 16928686 (-) False erp44
XM_043261045.1 mRNA downstream 81690 16915518 ~ 16928686 (-) True erp44
XM_043261555.1 mRNA upstream 4516 17027094 ~ 17035072 (-) True tbrg4
XM_043261554.1 mRNA upstream 4516 17027094 ~ 17035018 (-) False tbrg4
XM_043260697.1 mRNA upstream 30772 17053350 ~ 17059099 (-) True steap4
XM_043261696.1 mRNA upstream 151330 17173908 ~ 17185184 (-) True LOC122360848
XM_043261805.1 mRNA upstream 167905 17190483 ~ 17269769 (-) True si:dkey-12j5.1
unassigned_transcript_2159 other downstream 20002 16990302 ~ 16990374 (-) True trnat-ugu_49
TU167506 other downstream 328198 16680197 ~ 16682178 (-) False esrp1
XR_006252795.1 other downstream 770870 16232972 ~ 16239506 (-) False fam8a1b
XR_006252800.1 other downstream 781910 16218661 ~ 16228466 (-) False atxn1b
TU167253 other downstream 869141 16139319 ~ 16141235 (-) True G113267
XR_006252805.1 other upstream 1334839 18357417 ~ 18366990 (-) False slc45a4b
XR_006252779.1 other upstream 1470048 18492626 ~ 18520287 (-) False mroh1
XR_006252778.1 other upstream 1470048 18492626 ~ 18520287 (-) False mroh1
TU168645 other upstream 1626941 18649519 ~ 18650609 (-) True G114236
TU168660 other upstream 1647103 18669681 ~ 18671245 (-) False LOC122360747

Expression Profile