RNA id: XM_043260960.1


Basic Information

Item Value
RNA id XM_043260960.1
length 4657
RNA type mRNA
GC content 0.50
exon number 27
gene id ankrd28b
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 11869198 ~ 11885649 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAGGCAGCAGTGGCGGTAATGTTATGGAGTTTTCTCCCCTGCTCATCAGTGGCAAGTAGGAGACCCCAGGCCTACTCGAAACGCTAGATTTACCGACAACAAAACATCAGCATTCAAGTGGTGGTGGTGAAAACCTCCGTTTAGTTCTGCATGAGATCCAAAGAGATCATCGAAACATGGTGGTTCTCAAAATTCGAGACCAGCCTGCCCTGCTAAAAGCTATTTTCAATGTTGATCCGGACGAAGTACGCTCTCTCATTTTCAAGAAAGAGGATGTGAATGTACAAGACAATGAAAAAAGGACACCGCTGCACGCAGCTGCTTACCTAGGAGATGCTGAGATTATAGAGCTGTTAATTTTATCGGGGGCGAGGGTGAATGCCAAAGACAACAAATGGCTGACTCCTCTGCACCGCGCAGTGGCATCCTGCAGTGAGGAGGCGGTGCAGGTTTTGTTGAAGCACTCTGCCGACGTGAACGCTCGCGATAAGAACTGGCAGACTCCTCTACATGTGGCCGCCGCTAACAAAGCAGTCCGCTGCGCTGAGGCGTTGGTGCCACTGCTTAGCAACGTTAATGTATCTGATCGGGCTGGACGCACAGCTCTGCACCACGCTGCCTTCAGCGGCCACCTGGAGATGGTGCGGTTACTGCTATCCAGGGGAGCAAATATAAATGCGTTTGATAAGAAGGACAGAAGGGCAATCCATTGGGCGGCATACATGGGTCACATGGAGGTGGTCAAGCTGCTGGTGTCTCATGGTGCCGAGGTGACGTGTAAGGATAAGAAAGCGTACACACCCCTCCATGCTGCAGCGTCCAGTGGGATGATCAGTGTAGTGAAGTATCTGCTGGACCTAGGAGTTGATATGAACGAGCCAAACGCGTATGGGAACACGCCGCTGCACGTGGCATGCTACAACGGTCAGGATGTGGTGGTGAACGAGCTGATCGAGTGCGGCGCCAATGTGAACCAGGTTAATGAGAAGGGCTTCGCACCCCTGCACTTCACCGCTGCCTCGCGGCACGGAGCGCTCTGCCTTGAGCTGCTCGTGGGAAATGGAGCCGATGTCAATATCAAGAGTAAGGATGGTAAGACCCCTCTACATATGACCGCTATCCACGGGAGGTTCTCGAGATCTCAGGCGATTATTCAAAATGGTGCTGAGATAGACTGTGAAGATAAGAACGGGAATACTCCACTGCACATCGCAGCTCGATACGGACACGAACTTCTCATCAACACACTGATCACTAATGGAGCTGACACAGCCAAGAGGGGAGTTCATGGCATGTTTCCACTGCATTTGGCTGCTCTCAGCGGCTTCTCGGACTGCTGCCGTAAGCTGCTGTCATCTGGTAAGCTCTATCACTGCTCAGATAGTCAGCCAGTGCACTTTTTGTACATGGATTACATAAGTTATTGTCTTCCAGGCTTTGATATAGACACCCCTGATGACTTTGGAAGGACCTGTTTTCATGCTGCTGCTGCCGGCGGGAACCTCGAATGTCTGAATCTTCTTCTCAACACGGGGGCAGATTTCAACAGGAAAGACAGCTTCGGAAGGACACCTTTGCACTACGCAGCTGCAAACTGCAACTACCAGTGCCTGTTTGCTTTGGTGGGTTCAGGAGCCAATGTCAATGAGCTTGACAAGAGGGGCTGCACCCCCCTCCACTACGCCGCTGCTTCTGACGCAGATGGAAAGTGCCTGGAATATTTGCTGAGGAATGACGCCAACCCAGGGATCCGAGACAATCAGGGCTACAATGCAGTGCATTACGCCTCTGCTTATGGACACCGCTTGTGTCTGGAGCTGattgcGAGTGAAACTCCTTTAGATGTGTTAATGGAAACCTCAGGGACAGACATCCTAAATGACTCTGATGTACGTGCTCCTGTGAGCCCTCTCCACTTGGCTgCATATCATGGACATCACCAGGCTCTTGAGGTACTGGTTCAGTCTTTGCTGGATTTGGATGTGAGAACAGCGCAAGGACACACGCCGCTGGACCTGGCTGCCTTTAAAGGCCATGTTGAATGTGTGGATGTGCTCATCAACCAGGGGGCTTCCATCCTTGTGAAAGACTATACGCTGAAGCGAACCCCCATCCATGCCGCCGCCACTAATGGTCATTCTGAATGTCTCCGTTTGCTCATCGGAAATGCTGACCTGCAGAGTGCAGTGGACATTCAGGATGGGACTGGCCAGACGCCTCTGATGCTGTCAGTGCTGGGTGGACACACAGACTGTGTTTACTCCCTTATTAATAAAGGAGCCAATGTCGATGCCAAAGACAAATGGGGCCGCACTGCTCTGCACAGAGGGGCGGTGACGGGCCATGAGGAGTGTGTGGAGGCTCTGCTGCAGCACAGTGCCAGTTTCATGGTACGAGACTGTAGGGGGCGCTCTCCAGTGCACCTTGCGGCCGCCTGTGGTCACGTTGGGGTTCTGGGGGGCCTTCTGCATGCTGCCCAGTCAGTAGAGACCATTCCTGTCATCACTGACCACCAGGGCTACACGCCCCTGCACTGGGCCTGTTACAACGGTCATGACACATGTGTTGAGGTGTTGCTTGAGCAAGAGTTATTTCATAAGACTGAAGGGAACACCTTTAGCCCCCTTCACTGTGCCGTTATAAATGACAATGAAGGAGCAGCTGAGATGTTGATAGACACACTTACTCCTGCCATTGTCAATTCAACCGATTCCAAAAACAGGACTCCTCTTCATGCTGCGGCTTTCACAGATCACGTGGAGTGTCTGCAGCTCTTGCTGGGTCATAATGCACAGGTGAACTGTGTGGATGCTGGAGGCAAAACCCCACTCATGATGGCTGCTGAGAACGGCCAGACCAATGCAGTCGAGGTGTTGGTGAGCAGCGCGAAAGCAGATCTCACGCTACAGGACGCCAACAAAAACACTGCTCTCCATCTGGCCTGCAGTAAGGGTCATGAAACCAGTGCCTTGTTGATCTTGGAGAAGATCACTgacagaaacctcatcaactccACCAATGCAGCTTTACAAACGCCCCTGCATGTGGCTGCCAGAAATGGCTTGACTGTGGTTGTCCAAGAACTACTAGCTAAGGGTGCTAGTGTGCTAGCCGTGGATGAAAATGGCTACACTCCAGCCCTTGCCTGTGCTCCTAACAAAGACGTGGCAGATTGCCTGGCGCTGATCCTGGCCACCATGATGCCAGTGTCTCCCGGCGGAGGAGCGGTGCCCACCCTCACGTTCAGTGCCATCAATCACTACACCAGCCCCACCAAAAGCGTCACGTTCGACAGCCTGCCCATGCTCCGCTCCGAACACAGCTCCTACTGCAGTTTCAACAGCATCGGCCGCCACGACGGCTTCTACAAGGACGACGAGCTCAACGACTCCGACTCGGAGACGTACTGAAGACGAGGAGGGAAGGAGAGGCGCACATCTTGTCTTAATTACCCAGCGGCCGGCCACTCCGCAGAGCCTTAAGAGTCtctacacaaaacacacacacacacacacacatgtatgagGCGCAGCAGGCTGGCCCTCCCAGCCCCCGACCCCCCCCTTATCCATCAGCTCAACCTCTGCCAGCGCATCTTGCCCTACACAAATGTGACGGATAAGCGGGCGGACCTTTCCACATGGCAATAAAAGACAAGAATCGGCAGCCTGGGACCAACTTTTGCACAAGCGGTTTGACACTGTCGTAGTGCAACTGGGATTGAACGTTTAAATCCTCCCTCGCGAAAGACTGGGACGTTTGCGATGCTTTCAGCGGTTTCAAGTCAGTGTGCACTTCTGAATCGATCATTTACAACGCGgaaagaaatgatttattttttaaaatgcgatTTTAATACCTGTCAATTTCTCTGTCCCTCTAAAggggggtaaaaaaaaaaaaagtaacatttaaaatttcagtAGTTTCAAAAACGCAAGGGCAAATTGAGGACATGAACATCAGCCTTGTTATGCTTTTGGCCACAAGCATGAGTGATGTTAAAATGCTAACTCGTCTCCATCTTCAGTTTTAggataaattattctttttatctatggtatttatttttactttccaTATTTCATCATCATTTTGTGCCTTCATAAATTACTGTATGGAGGGAAGGGGCAGCTTGAGAGAACAAATCTACGATGCACAAGAAGTTCAACACTACGTCTGTGAAAAGCACTGAAAATGAAGAGGCAAACGgctcccagcatgctttgctcCGGAATGAGGAACACTGTGTAAACCAATGGTAGAACAGCATTTGATCTCTTTGTATGttgatatatgaatataaatatatattatattttttctggcTCTTATTAACTTTTTGGGGCAGGTATGCTCTCTTTGATTTAGCAAAAGAAACCACtcgattttttttctgtgatggcCTGTCGGAAACCTGTGTTCGTCTCTTTTCAAGCTTTGATTTTGGAATGACTGAAACTGGAAATCTGTTCAATACAGCTTCCCGGCTGAGAGGGGGTCAGCAGGGATCTGTTTCCTTTCCTGTCCTTTTCTCGGGGGGAAAGAGGAGAGTGATTGGTGCGGTCGATGGCCGCTGCTGCCCCCCTGCTCACAAAAAGAGATTCCTGTATATTTTATggttgattaaataaataaatgacttcagtACTTTGAA

Function

GO: NA

KEGG:

id description
K15502 ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164803 lncRNA downstream 1883 11865680 ~ 11867315 (-) False LOC122361049
TU164789 lncRNA downstream 49420 11818459 ~ 11819778 (-) True G111639
XR_006252803.1 lncRNA downstream 84864 11783695 ~ 11784334 (-) True LOC122360397
TU164772 lncRNA downstream 88026 11780787 ~ 11781172 (-) True G111625
TU164770 lncRNA downstream 95017 11773919 ~ 11774181 (-) True G111623
TU164819 lncRNA upstream 56715 11942364 ~ 11943955 (-) True G111661
TU164826 lncRNA upstream 97730 11983379 ~ 11983646 (-) True G111668
TU164845 lncRNA upstream 146944 12032593 ~ 12035126 (-) True G111680
TU164863 lncRNA upstream 189948 12075597 ~ 12076159 (-) True G111688
TU164864 lncRNA upstream 190804 12076453 ~ 12077007 (-) True G111689
XM_043261989.1 mRNA downstream 1883 11865680 ~ 11867315 (-) True LOC122361049
XM_043260858.1 mRNA downstream 4015 11855021 ~ 11865183 (-) True hacl1
XM_043260860.1 mRNA downstream 14204 11839901 ~ 11854994 (-) False colq
XM_043260859.1 mRNA downstream 14382 11839901 ~ 11854816 (-) True colq
XM_043260955.1 mRNA downstream 45647 11820787 ~ 11823551 (-) True fkbp14
XM_043260328.1 mRNA upstream 99985 11985634 ~ 11987450 (-) False twist1b
XM_043260327.1 mRNA upstream 99987 11985636 ~ 11987450 (-) False twist1b
XM_043260326.1 mRNA upstream 99987 11985636 ~ 11987450 (-) True twist1b
XM_043261680.1 mRNA upstream 113921 11999570 ~ 12000907 (-) True tmem196b
XM_043261777.1 mRNA upstream 121808 12007457 ~ 12012944 (-) False macc1
TU164609 other downstream 457421 11410678 ~ 11411777 (-) True G111490
TU164545 other downstream 582766 11270664 ~ 11286432 (-) False G111450
TU164396 other downstream 985987 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other downstream 1002770 10861951 ~ 10866428 (-) False LOC122360812
TU164366 other downstream 1120898 10746793 ~ 10748300 (-) False LOC122361037
TU165859 other upstream 1768411 13654060 ~ 13683909 (-) True zgc:92606
TU166030 other upstream 2348905 14234554 ~ 14301619 (-) True G112478
XR_006252733.1 other upstream 3023676 14909325 ~ 14913646 (-) False LOC122359907
TU167048 other upstream 3582831 15468480 ~ 15496375 (-) False rps19
TU167050 other upstream 3582831 15468480 ~ 15496375 (-) False rps19

Expression Profile