RNA id: XM_043260992.1


Basic Information

Item Value
RNA id XM_043260992.1
length 3852
RNA type mRNA
GC content 0.50
exon number 15
gene id wdr26a
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5012577 ~ 5025324 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AACATGCAGGCCAACGGGACCGGAGGACAGGAGCCGGAGCCGGAGCCGCAGCTGTCCTGCAGGAACGGAGAGTCCTCGTCCTCCGCCGCGGGAGCGGTGCACTCCAACGGGCTGCTGTCCTCCGCGAATAACGGGCTGCCGTCCACCGAGAGCCCGGCGTCAGACACCAGcacgaagaagaagaaacgaCTGTCCCAGAGCGACGAGGACGTGATCCGGCTCATAGGACAACATCTCCACGGGCTGGGACTCAATCAAACTGTGGACCTGTTGATGCAGGAATCGGGCTGCAGACTTGAGCATCCTGCTGCCACCAAGTTCAGGAATCACGTGATGGAGGGCGAGTGGGAAAAAGCGGAGAGCGACCTCAACGAGCTGAAAGCACTGATGCATTCACCCAGCGCCGTGGTGCGGATGAAGTTCCTGCTCCTGCAGCAGAAGTATCTGGAGTATCTGGAGGACGGGAAGGTCCTAGAAGCGCTGCAGGTGCTCCGAGCCGAACTCACTCCGCTGAAGTACAACACTGAACGGATCCACGTCCTCAGCGGGTACCTGATGTGCAGTCATCCCGACGACCTGCGAGCTAAAGCTGAGTGGGAAGGCAAAGGGACGGCCTCGCGCTCCAAACTCCTCGACAAGCTGCAGATTTcatCGTACCTGCCCCCGTCCGTGATGCTGCCGCCCCGCCGCCTGCAGACGCTCCTGAGGCAGGCCGTGGAGCTGCAGAGAGACCGCTGTCTCTACCACAACACCAAGCTGGACGGCGGACTGGACAACGTGTCTCTGCTCATAGACCACGTGTGCAGCAGGAAACAGTTCCCCTGCTACACTCAGCAGATCCTGACAGAGCACTGCAATGAAGTCTGGTTCTGTAAGTTCTCCAACGACGGCACCAAACTGGCCTCGGGGTCCAAAGACACGACAGTCATCATATGGCAGGTTGACCCTGACTCTCACCAGCTCAAGCAGCTGAAGACGCTGGAGGGTCATGCCTATGGGGTTTCCTATCTGGCCTGGAGCCCCGATGACACGTACCTGATAGCGTGCGGCCCCGACGACTGCTCCGAGCTCTGGCTGTGGAGCGTGCAGACAGGAGAACTGAGAACCAAGATGAGCCAGTCCCACGAGGACAGCCTGACCAGCGTGGCCTGGAATCCAGACGGCAAGCGTTTCGTTACCGGAGGTCAGAGAGGCCAGTTCTACCAGTGTGATCTGGACGGAAACCTGCTGGACTCCTGGGAGGGCGTCCGTGTTCAGTGTCTGTGGTGTCTGAGCGACGGCAGGACGGTGCTGGCCTCCGACACACACCAGCGCATACGTGGATACAACTTTGAAGATCTGACCGACAGGAACATAGTTCAAGAGGACCATCCCATAATGTCCTTCACCGTGTCAAAGAACGGGAGATTAGCTCTGTTAAACGTCGCAACTCAGgGAGTTCATCTGTGGGACCTGCAGGACCGGGTATTAGTCAGGAAGTACCAGGGCGTGACTCAGGGCTTCTACACCATCCACTCCTGCTTCGGCGGCTACAACGAAGACTTCATCGCCAGCGGCAGCGAAGACCACAAAGTTTACATCTGGCACAAACGCAGCGAGCTGCCCATAGCCGAGCTGACGGGTCACACGCGCACGGTCAACTGCGTGAGCTGGAACCCCGCTCTGCCGGGCCTGATGGCCAGCGCCTCGGACGACGGCACCGTGAGGGTCTGGGGCCCCGCACCCTTTCTGGACTCCCAGGAGACCGAGGGGCTTACCGGTACGGAGTGTTACAGCATGGACAGTTGATGTTGACTCCGGAGCAGATGTCCACTTTGGAAAATATTCAGTGAGACACACTATTAGACTTTGTGAATGAAGAACGAGAAATGAAGTACATCTAACGGCAGACGGATGTTTTTTCCTGGCGGTTTCACATCCCCTCCCGCAGCGCAGCGGAAACACACGAAGCCGGCGGCTGCCCTCCACCATCTGACTTCACATCCGTGTGGCGGCGCCAAACGCACACGCTACACACCTCGCCGAGGACACGCCCCTCATCGGCTCAAGCTCCGCCCCCTCTTCCTCACACTGCATCCCGAGTGGACGACTGCCTCCTGAAGCCACGCCCacccaaaaaacacacacacacgcgcggaCAAACATCGCTCAGATCGTTATTTATTACggctttaatttattattgtgaaTGAATCAAGGCCTCAGGCTTGCTTTGTGTTCTGTACAATATTCACTCGGCGAGGggacgaaaaaaaaaagtgcaaactCTCGCACGTGTCGGAGAGAGAACAAAtcatatctttatttttcagcatgAACTTCTTTTAGCCACCTCGTATGCTTGAAAGTAAGTGTCTTCACCAGCAGATATAAGATAACGTTTTCGTTTCCCTCAACGGcgatttttaaatgactgaatcTACCGGCATTTTTTTAACCGATTGATATTCGTTTCGATTCGAGAAGTCCAATCATGACCCCCTCTCCCCACTGTTTTTCATTGCTTACGGTACTTTATTCTGAGAGCGGGAAGTGATGGATTGTTATTCTTTAGTCTGGAGATGTAAGATTTGTTAAGAAAGACGGGACGGAACAAAACAGGTTGCTTTTCGGTAACGGGGTTGATGACAAGCTAAGCCGGGCTCGCTGAGAGCATGCTAACGACACGCCAGTGAGCCGACGTCACGTTCCACATGTAAATACTGGCCTTCAGCGTGCGTGCTTTGCCTTTGTTAGGTGTTCGTGACGTGCTTGAGGTCATTTTTGCAGTGAATGTTCAGGCTCTGGGTGTGATTTTTGTCATGGTAAGTACATCAGAACGGACTCCCAAATGTGCAGTTTCACCATGTTcatccgatttttttttttttgttttttttctctcctctttgGTCTCGTTTCTTCTCGTATTATCGCATCTCgactttttatgtttctttttatgcttttcaGACATGTATATGATTTACTCATCAGCTTTTTCTTAGTTTTATTGGCTTTTATTTTGgggttgatttatttgtttcGCTTTTTCCCTTGTATTATCGTATAACGGATGTCTTGGCAAGTGGCCtcttaaatgcttttttctatTGGTGAATTTCTTATACTTTCGTACCATATGACGCATTAGTACACACAGGTGTACCCGTAATGATTTAGGTATTCAGAGTGTCATCACTCGCCTACTATGATTTATTCTGTAATTACTTGCtcttcatatacatatatatgaagaatctatactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttataaaaatataaatatgtgtgtgtatttcttgCCATGTATCCTCCCTTGCAAATGTTAACCGTTTCTCACCTGCATCAGGTAAACTCCTTGTACAGGTTATTCGCTCCCCGACCAGCCGAACCTGTTCCGTTAGCGAAGGAGTGACGCACACGAacgaaaaagacaaaaacaggtGCATGCAGAAACACCCTCACACATACGCGAGATCTCACCAAATCGTGGTGTTGTACGTTCTGGTTTATGCAACTGAACTTTCCTTTACCTTCTGaatatttgtgtttcatttaagTCTTAGTTTGACTTTCTTGTGCTCCGCGGCGGTGTAACAGGCGGGGTGACGGTAACGGTAGCGCCCTGGTGGAGTTCTGGGCTACGACTAAGTTTATTGCAGTCAGGTTCTGAGGATCTGTTTCGCATTTCAGTGTGTTATTATTCTAAGTGATTGTACTATTATGTATTGTTCTGTAGGAGAGGTGTTATGTATACATACTTTCAATAAAGCATTCAGGGTTTTAAACTA

Function

GO: NA

KEGG:

id description
K22382 WDR26; WD repeat-containing protein 26

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU162295 lncRNA downstream 147898 4864417 ~ 4864679 (-) True G109836
TU162271 lncRNA downstream 151546 4860248 ~ 4861031 (-) True G109825
TU162262 lncRNA downstream 154179 4855654 ~ 4858398 (-) True G109824
TU162254 lncRNA downstream 189891 4821555 ~ 4822686 (-) True G109820
TU162253 lncRNA downstream 192841 4818807 ~ 4819736 (-) True G109819
TU162380 lncRNA upstream 63577 5088901 ~ 5089304 (-) True G109887
TU162384 lncRNA upstream 152007 5177331 ~ 5177535 (-) True G109891
TU162405 lncRNA upstream 165026 5190350 ~ 5190705 (-) True G109906
TU162406 lncRNA upstream 165457 5190781 ~ 5191350 (-) True G109907
XR_006252732.1 lncRNA upstream 173467 5198791 ~ 5207419 (-) True LOC122359853
XM_043260937.1 mRNA downstream 8136 4995173 ~ 5004441 (-) True fez2a
XM_043260936.1 mRNA downstream 17539 4990978 ~ 4995038 (-) False clec3ba
XM_043260935.1 mRNA downstream 17539 4990978 ~ 4995038 (-) True clec3ba
XM_043261291.1 mRNA downstream 40004 4929158 ~ 4972573 (-) True lars2
XM_043261293.1 mRNA downstream 88159 4905857 ~ 4924418 (-) False limd1a
XM_043261416.1 mRNA upstream 1846 5027170 ~ 5046883 (-) False adcy3a
XM_043261415.1 mRNA upstream 1846 5027170 ~ 5046881 (-) True adcy3a
XM_043260153.1 mRNA upstream 65187 5090511 ~ 5095595 (-) True lyplal1
XM_043261461.1 mRNA upstream 113370 5138694 ~ 5170630 (-) True tgfb2
XM_043260019.1 mRNA upstream 148326 5173650 ~ 5176812 (-) False rrp15
TU162095 other downstream 917073 4094757 ~ 4095504 (-) True G109724
TU161934 other downstream 1882598 3128061 ~ 3129979 (-) True G109600
TU161510 other downstream 4129825 882459 ~ 882752 (-) True G109287
TU161498 other downstream 4379680 632465 ~ 632897 (-) True G109275
XR_006252910.1 other downstream 4717592 294867 ~ 294985 (-) True LOC122361256
XR_006252797.1 other upstream 206887 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other upstream 210322 5235646 ~ 5245460 (-) False vegfaa
XR_006252935.1 other upstream 334186 5359510 ~ 5359679 (-) True LOC122361376
TU162692 other upstream 791740 5817064 ~ 5818362 (-) False ndufa3
TU162864 other upstream 918897 5944221 ~ 5948789 (-) False LOC122359839