RNA id: XM_043261179.1


Basic Information

Item Value
RNA id XM_043261179.1
length 767
RNA type mRNA
GC content 0.47
exon number 4
gene id mrpl51
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 5820991 ~ 5822850 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTAATCTATTCATCAAAACTCATTACATCTGTACTGTCTGTGCGAAACTACAAGACTTTTCATTTGGAAAATACATTTACCATAATATGTataggacttttattttgaaaatggtcTAATGGCCGCCGCGGCAGTGTGTACACATGGAGATCGGTCTGACATCGCTGGCCTCATCTAGAAGATTTCAAAGATTTTAAAGCATATAACGCCCTTCTGTCGATTGAAATTACTTTCCCCGTTTTCGACGCGGGTTCTCCGAAGCATGTCTGTGTTCGGAGGAGCGCTGAGGAGCTTCTGTCAGTCCTCGGCTCGGCTCTTCAGCACAGGCACCTGCGCTAGAATACGAATGCACGCCATTCCCAAACTGAAGGAGGTGGATCGATGGACGGAGAAGAGGAGCATGTTTGGAGTCTATGACAACATCGGGATCTTGGGAGATTTTAAAGCTCATCCGAAAGACTTGATCCGAGGACCGGTGTGGCTCAGGGGCTTCAGAGGAATCGAGCTCCAGCGGCTCATCAGGAAGAAGAGGATGGTGGGAGACCGGATGATGACCGAGGACAAGCACAACCTGGACAAGAGGATCAGCTTCCTGTACCGCCGCTTCAACAGATACGGCAAACACAGATAGACTCGCCTTCGCTCGGCCAGAATTCAGTGTGTGTCAAAAGCTGCTGTCCCGttcattaaactgtaaaaatgttgtcatgATTGCAAAGATTGACCTCAGATGATGCTGATGAGTCccattaaaaagatttattaa

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005762 mitochondrial large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K17432 MRPL51; large subunit ribosomal protein L51

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU162691 lncRNA downstream 4118 5815560 ~ 5816873 (-) True G110102
TU162688 lncRNA downstream 7307 5809971 ~ 5813684 (-) True G110100
TU162689 lncRNA downstream 8470 5809971 ~ 5812521 (-) False G110100
TU162682 lncRNA downstream 36762 5783296 ~ 5784229 (-) False si:dkey-283b15.2
TU162680 lncRNA downstream 39028 5778754 ~ 5781963 (-) True G110093
TU162695 lncRNA upstream 29582 5852432 ~ 5852762 (-) True G110106
TU162868 lncRNA upstream 79727 5902577 ~ 6184069 (-) False LOC122359839
TU162879 lncRNA upstream 174771 5997621 ~ 5999361 (-) True G110206
TU162905 lncRNA upstream 295935 6118785 ~ 6119767 (-) True G110221
TU162910 lncRNA upstream 314257 6137107 ~ 6207805 (-) True G110224
XM_043261652.1 mRNA downstream 2373 5817040 ~ 5818618 (-) True ndufa3
XM_043260424.1 mRNA downstream 30457 5782667 ~ 5790534 (-) False si:dkey-283b15.2
XM_043260423.1 mRNA downstream 31989 5782667 ~ 5789002 (-) True si:dkey-283b15.2
XM_043260679.1 mRNA downstream 247191 5571501 ~ 5573800 (-) True dctn3
XM_043260675.1 mRNA downstream 250209 5560481 ~ 5570782 (-) False ttk
XM_043260635.1 mRNA upstream 11307 5834157 ~ 5850214 (-) False arnt
XM_043260632.1 mRNA upstream 11307 5834157 ~ 5850214 (-) False arnt
XM_043260634.1 mRNA upstream 11307 5834157 ~ 5850214 (-) False arnt
XM_043260631.1 mRNA upstream 11307 5834157 ~ 5850214 (-) True arnt
XM_043261014.1 mRNA upstream 30626 5853476 ~ 5873058 (-) True cers2b
TU162692 other downstream 2629 5817064 ~ 5818362 (-) False ndufa3
XR_006252935.1 other downstream 461312 5359510 ~ 5359679 (-) True LOC122361376
XR_006252797.1 other downstream 575530 5232211 ~ 5245461 (-) True vegfaa
XR_006252796.1 other downstream 575531 5235646 ~ 5245460 (-) False vegfaa
TU162095 other downstream 1725487 4094757 ~ 4095504 (-) True G109724
TU162864 other upstream 121371 5944221 ~ 5948789 (-) False LOC122359839
TU162885 other upstream 206358 6029208 ~ 6034777 (-) True G110208
TU162893 other upstream 273825 6096675 ~ 6099927 (-) True G110215
TU163014 other upstream 1259112 7081962 ~ 7083524 (-) True G110303
TU163032 other upstream 1372640 7195490 ~ 7201381 (-) True LOC122360222

Expression Profile